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  5. PTI_00G01840.1

PTI_00G01840.1


Description : Hypothetical protein


Gene families : OG_01_0000066 (OrthoFinder) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: PTI_00G01840.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
PTI_00G01000.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_00G01660.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_00G01920.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.04 OrthoFinder
PTI_00G02170.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_00G02190.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_00G02240.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.11 OrthoFinder
PTI_00G02270.1 No alias Hypothetical protein 0.13 OrthoFinder
PTI_00G02280.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_00G02470.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_00G02490.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_00G04600.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_00G04610.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_01G08070.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_01G08080.1 No alias Hypothetical protein 0.06 OrthoFinder
PTI_01G11820.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.18 OrthoFinder
PTI_03G00500.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.13 OrthoFinder
PTI_03G04550.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
PTI_03G05890.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_03G05910.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_03G05920.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_03G05950.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_03G05970.1 No alias Hypothetical protein 0.08 OrthoFinder
PTI_04G00260.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_06G02350.1 No alias Hypothetical protein 0.05 OrthoFinder
PTI_06G03610.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.13 OrthoFinder
PTI_08G00150.1 No alias Hypothetical protein 0.03 OrthoFinder
PTI_09G00400.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.15 OrthoFinder
PTI_09G01520.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.08 OrthoFinder
PTI_09G02870.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_16G00080.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_16G00750.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.07 OrthoFinder
PTI_16G02500.1 No alias Hypothetical protein 0.1 OrthoFinder
PTI_17G00090.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.05 OrthoFinder
PTI_17G02300.1 No alias Hypothetical protein 0.07 OrthoFinder
PTI_18G01250.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.15 OrthoFinder
PTI_18G02840.1 No alias Hypothetical protein 0.14 OrthoFinder
PTI_19G03110.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.1 OrthoFinder
PTI_24G00370.1 No alias Hypothetical protein 0.09 OrthoFinder
PTI_24G01650.1 No alias Hypothetical protein 0.13 OrthoFinder
PTI_25G00030.1 No alias Hypothetical protein 0.04 OrthoFinder
PTI_27G00060.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.14 OrthoFinder
PTI_27G01660.1 No alias Hypothetical protein 0.11 OrthoFinder
PTI_27G01670.1 No alias Hypothetical protein 0.13 OrthoFinder
PTI_31G00950.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.12 OrthoFinder
PTI_31G00960.1 No alias Reverse transcriptase, RNA-dependent DNA polymerase... 0.15 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
CC GO:0031464 Cul4A-RING E3 ubiquitin ligase complex IEP Enrichment
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!