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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | 4h after treatment | 4h after treatment,No nitrate | 8h after treatment | 8h after treatment,No nitrate | 20C | 20h after treatment | 20h after treatment,No nitrate | 20h after treatment,Nocodazole added | 36h after treatment | 36h after treatment,No phosphate | Blue light,10min after light change | Blue light,60min after light change | Bohlin | CCAP1055/1,20C | CCAP1055/1,20C,High CO2,OligoDT primed | CCAP1055/1,20C,Low CO2,OligoDT primed | CCAP1055/1,20C,Normal CO2,OligoDT primed | CCMP2561 | CCMP2561 Nitrase Reductase Knockout | CCMP632 | CCMP632,24h | CCMP632,48h | CCMP632,72h | CCMP632,High light acclimated WT | CCMP632,Low light acclimated WT | NEPCC640,8h,1000ppmv CO2 | NEPCC640,8h,390 ppmv CO2 | No light,8h after treatment | Pt-1 | Pt-1 8.6 | Pt-1 8.6,With nitrogen | Pt-1 8.6,Without nitrogen | Red light,0min before light change | UTEX 646,Blue light | UTEX 646,No light |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| - | - | - | - | 0.8 | 0.42 | - | - | - | 2.61 | 1.6 | 1.81 | - | - | - | - | - | -3.6 | -2.93 | - | - | 0.31 | - | - | - | - | - | 2.1 | - | 0.33 | - | 2.33 | 1.79 | 1.63 | -0.55 | |
| 0.11 | 1.07 | -0.2 | 1.06 | 2.87 | -0.02 | 0.43 | 2.79 | -0.1 | 0.96 | -2.4 | -2.15 | -0.84 | -2.42 | - | -5.06 | - | -3.03 | -2.67 | -3.24 | -1.49 | -1.72 | -1.78 | -2.01 | -5.7 | -1.58 | -0.19 | 0.57 | -3.73 | 0.88 | -1.64 | 0.54 | -2.51 | -6.23 | -4.58 | |
| -0.98 | 1.84 | -0.02 | 1.3 | 0.04 | 1.14 | 0.33 | 0.89 | 1.5 | 0.87 | -2.6 | - | - | - | - | - | - | -3.4 | -4.61 | - | - | - | - | - | - | -0.33 | - | 2.63 | - | 1.41 | - | 2.58 | -0.79 | - | - | |
| 0.98 | 0.95 | 0.4 | 0.68 | -0.33 | 0.53 | 0.62 | 1.47 | 0.73 | 0.93 | -2.86 | -4.48 | -4.64 | -10.33 | - | - | -10.13 | -5.95 | -2.62 | -6.43 | -4.36 | -6.92 | -5.3 | -3.56 | -5.84 | -0.66 | -0.01 | 1.76 | -4.55 | 2.73 | -4.4 | 2.49 | -3.67 | -6.97 | -8.28 | |
| 1.51 | 0.28 | -0.39 | 0.9 | 1.55 | 1.65 | -0.66 | 1.11 | 0.77 | 0.64 | -2.22 | - | - | - | - | - | - | -4.95 | -4.75 | -2.19 | -1.08 | -0.06 | 1.2 | - | - | - | - | 2.0 | - | 2.16 | -1.04 | 1.53 | - | -3.3 | - | |
| 0.7 | 0.34 | 0.25 | 0.41 | 1.87 | 0.91 | 0.11 | 1.1 | 1.63 | 0.79 | - | - | - | - | - | - | - | -2.97 | -6.76 | 0.08 | 0.44 | 1.42 | 1.29 | 1.02 | -2.24 | - | - | 2.34 | -2.06 | -1.07 | -2.51 | -2.86 | - | - | - | |
| 0.69 | 0.25 | 0.3 | -0.39 | 1.72 | -1.93 | -0.33 | 3.0 | -0.51 | -1.73 | - | - | -0.81 | - | - | -0.24 | -0.23 | -1.46 | -2.48 | -0.04 | 1.85 | 0.78 | -0.2 | -1.89 | -2.0 | 1.29 | 0.91 | -1.25 | -1.68 | -1.18 | - | -0.24 | - | - | - | |
| - | - | - | - | 3.07 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.41 | - | 4.41 | - | - | - | |
| 0.85 | 0.91 | 0.45 | 0.68 | -2.29 | 1.07 | 0.78 | -0.09 | 1.34 | 1.45 | -2.13 | -2.13 | -6.96 | -4.4 | -4.29 | -5.13 | -5.97 | -3.4 | -2.31 | -0.41 | 1.41 | 1.53 | 0.48 | -0.1 | -1.68 | -7.16 | -6.55 | 1.79 | -6.77 | 0.47 | -0.33 | 0.72 | -2.24 | -1.47 | -1.37 | |
| - | - | - | - | - | - | - | - | - | - | 2.61 | 2.84 | - | - | - | - | - | -2.86 | - | - | 2.3 | 3.09 | 2.58 | - | - | - | - | - | - | - | - | - | 1.12 | - | - | |
| -2.28 | -2.97 | -2.31 | -3.01 | -0.88 | -2.19 | -2.51 | -2.19 | -1.77 | -1.43 | -0.61 | -0.26 | 0.63 | -1.44 | -2.26 | -3.69 | -2.46 | -0.21 | -0.37 | 0.97 | 0.58 | -0.73 | 0.28 | -1.06 | -1.71 | -5.04 | -7.36 | -1.43 | -1.7 | 2.97 | -1.09 | 3.37 | -0.6 | -0.3 | -3.31 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | -3.47 | - | - | -1.16 | - | 0.31 | -4.22 | - | - | -0.4 | - | - | - | - | -0.13 | 2.47 | 1.55 | 4.2 | - | 2.19 | - | |
| - | -1.26 | -3.31 | -1.19 | 1.11 | -3.1 | -1.44 | 1.67 | -1.69 | -0.86 | -3.07 | -3.43 | -0.1 | - | - | - | - | -3.47 | -2.0 | -2.56 | 0.1 | -0.83 | -0.12 | 0.5 | -1.74 | - | - | -0.32 | -6.71 | 3.06 | 0.46 | 3.35 | -3.28 | -3.98 | -1.03 | |
| - | - | - | - | - | - | - | - | -24.21 | - | - | - | - | - | - | - | - | -3.43 | -2.07 | 3.44 | - | - | - | - | - | - | - | - | - | 3.16 | -6.48 | 3.9 | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | 1.61 | 3.17 | - | 2.2 | - | - | - | - | - | - | 0.86 | - | - | - | - | - | - | 3.33 | - | - | - | - | 1.71 | 1.69 | - | |
| 0.88 | 0.68 | 0.17 | 0.39 | 0.43 | 0.43 | 0.7 | 1.82 | 0.71 | 0.86 | 0.84 | -0.65 | - | -5.24 | -3.22 | -2.25 | -1.92 | -3.0 | -4.18 | -2.32 | -1.75 | -3.11 | -3.16 | -3.32 | -5.32 | -1.43 | -0.74 | 1.38 | -6.39 | 2.0 | -5.52 | 2.39 | -0.36 | -3.49 | -4.08 | |
| - | - | - | - | - | - | - | - | - | - | - | -3.57 | - | - | - | - | - | -1.25 | - | 0.83 | - | - | - | 1.03 | 0.01 | - | - | - | - | 2.69 | 0.76 | 3.84 | -2.68 | 2.78 | -2.33 | |
| -0.07 | 0.55 | -0.06 | 0.36 | -0.26 | 0.37 | 0.31 | 0.34 | 0.13 | 0.59 | -0.82 | -0.52 | 0.86 | -0.51 | -0.96 | -1.47 | -0.28 | -0.26 | -0.68 | 0.06 | 0.13 | 0.01 | -0.65 | 0.03 | 0.54 | 0.12 | -1.22 | 0.51 | -1.45 | 0.7 | -0.4 | 0.98 | -0.79 | -0.33 | -0.22 | |
| 1.7 | -2.05 | -0.87 | -0.59 | 1.76 | 0.52 | - | 0.89 | 0.32 | -0.9 | -0.49 | -2.35 | - | - | - | - | - | -2.69 | -1.77 | -1.13 | 1.58 | 2.95 | - | -0.39 | - | - | - | 0.2 | - | 1.74 | - | 1.88 | -1.52 | - | - | |
| - | - | - | - | -0.37 | - | - | 3.16 | - | - | 0.92 | 0.89 | - | - | - | - | -0.49 | -4.05 | -0.85 | - | - | 0.07 | - | - | - | 2.33 | 2.34 | -0.47 | - | 0.76 | 2.3 | - | 0.57 | -2.11 | - | |
| 0.27 | - | - | - | -0.31 | - | - | 0.38 | - | -0.59 | 2.7 | 2.29 | - | - | - | - | -0.65 | -3.35 | - | -2.68 | - | - | - | - | - | -3.0 | - | - | - | 2.08 | - | 3.03 | 1.98 | 0.42 | -0.14 | |
| 0.2 | 0.95 | 0.45 | 1.32 | 0.78 | 0.7 | 1.84 | 0.76 | 1.2 | 0.84 | -1.23 | -1.31 | -0.63 | -3.92 | -4.01 | - | - | -5.47 | -5.98 | -1.77 | 1.0 | 0.9 | 1.27 | 0.32 | -1.38 | - | - | 0.84 | -4.68 | -0.1 | -2.02 | 0.94 | -1.36 | -4.09 | -3.15 | |
| - | - | -1.06 | - | 2.07 | 0.11 | 0.9 | 1.31 | 0.34 | - | 2.14 | 2.14 | - | - | - | - | - | -3.01 | -3.63 | -2.98 | -1.56 | - | - | - | -0.57 | - | -1.14 | 0.13 | - | 1.36 | - | 2.2 | 1.74 | -0.19 | -0.88 | |
| 1.4 | 1.22 | 0.75 | 0.85 | -2.36 | 1.58 | 1.04 | 0.69 | 1.41 | 1.6 | -2.05 | -1.69 | -5.36 | -3.15 | - | - | - | -4.55 | -3.5 | -3.44 | -1.02 | -2.44 | -1.86 | -0.3 | -2.81 | - | -5.69 | 2.12 | -8.26 | 1.27 | 0.45 | 1.44 | -2.44 | -3.79 | -3.55 | |
| -0.53 | 0.24 | -0.74 | 0.83 | 1.3 | -0.15 | 0.1 | 3.15 | -0.53 | -0.07 | -1.51 | -1.27 | -2.79 | -0.48 | -2.44 | -3.05 | -2.69 | -3.46 | -2.61 | -1.45 | 0.49 | 0.49 | -0.08 | -3.07 | -3.43 | -3.27 | -2.66 | -0.14 | -4.21 | 1.79 | -0.61 | 1.69 | -1.42 | -3.35 | -3.84 | |
| - | - | - | 1.84 | 1.07 | 1.62 | - | - | 1.69 | - | 0.74 | 1.32 | 1.69 | - | - | - | - | - | -2.82 | - | - | - | - | - | - | - | 2.47 | - | - | 0.74 | 2.74 | - | - | - | 0.65 | |
| 0.62 | 0.26 | 0.85 | 0.86 | 2.3 | 0.97 | 1.05 | 2.06 | 0.59 | 0.12 | -1.13 | -1.2 | -2.49 | -3.56 | -4.54 | -3.78 | - | -3.76 | -1.32 | -2.54 | 0.56 | -0.14 | 0.03 | 0.85 | -3.37 | -4.18 | -4.42 | 1.74 | -2.01 | -0.33 | -1.72 | -1.52 | -1.57 | -4.2 | -2.59 | |
| -0.43 | 0.73 | -0.66 | 1.35 | 1.3 | 1.1 | 2.65 | 0.5 | 1.51 | 0.74 | -1.87 | -2.86 | 1.36 | -4.06 | - | - | - | -3.79 | -5.4 | -2.47 | 1.44 | 0.78 | 1.41 | -3.41 | -2.32 | -2.68 | -3.32 | -0.15 | -3.4 | -2.21 | -4.04 | -1.93 | -3.54 | -7.54 | -5.06 | |
| 0.85 | 0.74 | 1.38 | 1.13 | 1.02 | 1.19 | -2.07 | 2.0 | 0.69 | -0.26 | -1.57 | -2.58 | -4.43 | -2.72 | -3.47 | -4.41 | -2.84 | -2.4 | -0.14 | -2.91 | 0.32 | -0.14 | -0.82 | -0.06 | -2.5 | -1.97 | -4.1 | 2.05 | -2.57 | 0.53 | -1.97 | 1.53 | -2.17 | -3.72 | -2.46 | |
| - | - | - | - | - | - | - | - | - | - | 2.78 | 4.12 | - | - | - | - | - | -15.08 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 3.43 | - | |
| 0.31 | 1.19 | 0.69 | 1.35 | 0.61 | 0.71 | 2.03 | 0.6 | 1.53 | 1.46 | -3.14 | -3.4 | - | - | - | -2.49 | - | -1.86 | -1.89 | -0.43 | -0.56 | -2.12 | -2.81 | - | -2.85 | - | - | 1.57 | -4.12 | 1.62 | -1.61 | 1.69 | -3.75 | -3.24 | -2.22 | |
| - | - | - | - | - | - | - | - | - | - | - | 5.13 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| - | - | - | - | 0.81 | 1.87 | 2.04 | - | - | - | - | - | - | - | - | - | - | -2.04 | - | - | - | - | - | - | - | - | - | - | - | 2.34 | 2.89 | 3.68 | - | - | - | |
| 1.07 | 1.46 | 0.83 | 0.87 | 2.19 | 1.02 | 1.13 | 0.16 | 0.88 | 1.07 | -1.94 | -1.43 | -4.1 | -6.11 | -3.2 | -1.36 | -1.82 | -2.33 | -3.3 | -0.8 | 0.96 | 1.42 | 0.24 | -2.02 | -4.12 | -5.69 | -3.84 | 1.48 | -3.25 | -0.87 | -2.72 | -3.35 | -1.82 | -5.63 | -2.78 | |
| -0.73 | 0.89 | 0.34 | -0.42 | 1.14 | 0.75 | 0.61 | 3.24 | 1.03 | 0.57 | -3.52 | -3.19 | - | - | - | - | - | -1.56 | -1.05 | - | 2.23 | 0.61 | - | - | - | - | - | 0.02 | -4.33 | 0.76 | - | 0.27 | - | -2.0 | -0.51 | |
| 0.49 | 1.17 | - | 2.99 | - | - | 1.56 | - | 2.29 | 2.2 | - | - | - | -1.14 | - | - | - | -2.66 | -2.28 | 0.34 | - | - | - | - | - | 0.08 | - | 1.16 | - | 0.03 | 2.03 | - | - | - | -0.96 | |
| - | 2.16 | - | - | 1.35 | - | - | 2.12 | - | - | - | 0.42 | 2.13 | - | - | - | - | - | - | 0.06 | 1.69 | - | - | - | - | 1.55 | - | - | - | 1.1 | 3.1 | - | - | - | - | |
| 0.44 | 1.15 | 0.69 | 0.95 | 1.12 | 1.22 | 1.17 | 0.93 | 1.32 | 0.93 | -2.74 | -3.05 | - | -4.62 | -4.21 | -5.58 | -3.84 | -2.33 | -3.78 | -0.42 | 1.16 | 1.13 | 2.14 | -3.22 | -1.95 | -5.13 | - | 1.27 | -2.64 | -0.86 | -1.62 | -1.23 | -2.75 | -7.65 | -3.86 | |
| 0.53 | 1.05 | 0.93 | 1.18 | 2.69 | 0.6 | 1.58 | 1.02 | 1.04 | 0.83 | -4.03 | -3.72 | -1.77 | -6.28 | -6.66 | - | - | -2.27 | -1.16 | -3.56 | -0.41 | 0.02 | -1.11 | -2.24 | -3.36 | -4.7 | - | 2.09 | -4.33 | 0.28 | -4.41 | 0.0 | -3.57 | -5.01 | -5.24 | |
| 1.02 | 1.64 | 1.1 | 1.21 | 2.27 | 1.43 | 1.5 | 0.9 | 1.62 | 1.81 | -4.71 | -4.43 | -2.36 | - | - | - | - | -5.95 | -5.37 | -2.39 | -1.89 | -2.88 | -1.04 | - | -6.32 | -5.65 | - | 1.96 | -6.6 | -0.82 | - | -0.53 | -5.28 | - | -6.19 | |
| 1.3 | 1.15 | 0.48 | 1.04 | 1.31 | 0.81 | 1.72 | 0.91 | 0.66 | 1.22 | -4.34 | -3.39 | -3.88 | -4.03 | -2.55 | -2.26 | -2.92 | -2.15 | -0.75 | -0.52 | 1.85 | 1.13 | -0.14 | -3.87 | -4.07 | -2.46 | - | 1.83 | -1.79 | -2.06 | - | - | -4.09 | -5.38 | -3.99 | |
| 1.43 | 2.67 | - | 0.71 | -0.05 | 0.5 | - | 3.27 | 0.57 | - | -0.38 | 0.44 | 0.57 | - | - | - | - | - | -3.94 | - | - | - | - | - | - | - | 1.35 | - | - | -0.38 | 1.62 | - | - | - | -0.47 | |
| 0.99 | 1.09 | 0.63 | 0.94 | 2.53 | 0.94 | 0.93 | 1.57 | 1.3 | 0.74 | -7.65 | -7.92 | -0.78 | - | -2.26 | -1.59 | -4.37 | -2.88 | -2.99 | -1.41 | 0.0 | 0.11 | -0.49 | -0.69 | -2.28 | -2.59 | -1.52 | 1.98 | -1.95 | -2.33 | -2.2 | -3.05 | -7.52 | - | - | |
| 0.75 | 0.79 | 0.77 | 1.44 | 1.65 | 0.93 | 0.88 | 1.2 | 0.95 | 0.6 | -1.28 | -1.26 | -2.51 | -3.52 | - | - | - | -3.5 | -1.84 | -2.65 | 0.98 | 0.65 | -0.05 | -0.4 | -4.68 | -2.3 | -3.27 | 2.04 | -4.35 | 0.18 | -2.95 | 0.6 | -2.13 | -5.75 | -3.11 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.34 | - | - | - | - | - | - | - | - | - | - | - | 2.63 | - | 4.48 | - | - | 2.0 | |
| 0.69 | 1.15 | 0.37 | 1.23 | 1.03 | 0.97 | 1.5 | 0.47 | 1.59 | 1.95 | -5.16 | -8.15 | - | - | -1.98 | -17.38 | -1.01 | -2.83 | -1.77 | 0.37 | 1.54 | 0.51 | 0.29 | -3.28 | -6.06 | -4.15 | -4.36 | 1.7 | -4.25 | -2.17 | -3.03 | -1.26 | -6.58 | -4.56 | -5.78 | |
| -0.55 | 0.81 | 0.23 | -1.46 | -0.66 | 1.08 | 0.62 | 1.83 | -0.17 | 0.1 | -3.56 | -2.24 | - | - | -2.79 | -1.54 | -2.16 | 0.55 | -0.33 | -1.17 | -0.35 | 0.89 | -1.31 | 2.36 | -0.74 | -0.9 | 0.16 | 0.64 | -2.26 | 0.6 | -1.27 | 1.74 | -3.83 | - | - | |
| - | - | - | - | 3.08 | - | - | - | - | - | - | - | - | - | - | - | - | -1.62 | - | - | - | - | - | - | - | - | - | - | - | 2.39 | 4.39 | - | - | - | - | |
| 1.0 | 1.08 | 1.3 | 0.75 | 1.18 | 1.36 | 1.83 | 1.75 | 1.35 | 1.98 | -3.66 | -4.0 | -1.86 | - | - | - | - | -7.12 | - | -2.55 | -0.56 | -5.11 | -2.04 | - | - | -4.42 | - | 1.55 | -3.38 | 1.29 | -2.88 | 0.23 | -3.63 | -5.51 | - | |
| 0.31 | 0.1 | 0.7 | 0.61 | -1.52 | -0.16 | -0.01 | 3.26 | -0.29 | -0.07 | -0.1 | -0.1 | -3.58 | -1.87 | -5.64 | -2.66 | -4.63 | -2.87 | -2.96 | 0.29 | -0.45 | -0.82 | 0.1 | -0.23 | 0.71 | -4.92 | -4.04 | -0.48 | -2.3 | 1.52 | -0.03 | -0.41 | -0.05 | -0.94 | -3.97 | |
| - | -26.55 | -14.83 | - | 0.02 | -26.5 | - | -16.43 | -22.68 | -22.51 | -4.96 | -3.87 | - | -5.29 | -30.05 | -0.83 | - | -1.64 | -0.76 | -28.58 | -4.2 | -6.64 | 0.63 | -2.21 | -13.22 | - | - | -5.92 | -0.13 | 3.1 | 2.9 | 3.76 | -4.01 | -5.95 | - |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.