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Description : Reverse transcriptase, RNA-dependent DNA polymerase [Interproscan].
Gene families : OG_01_0000066 (OrthoFinder) Phylogenetic Tree(s): OG0000066_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: PTI_00G01600.1 | |
| Cluster | HCCA: Cluster_46 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| PTI_00G01000.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_00G01920.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.04 | OrthoFinder | |
| PTI_00G02170.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_00G02190.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_00G02200.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_00G02240.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.09 | OrthoFinder | |
| PTI_00G02270.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_00G02280.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_00G02490.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_00G04610.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_01G05240.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.05 | OrthoFinder | |
| PTI_01G08060.1 | No alias | Hypothetical protein | 0.09 | OrthoFinder | |
| PTI_01G08080.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_01G11820.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.12 | OrthoFinder | |
| PTI_03G00510.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_03G04550.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.05 | OrthoFinder | |
| PTI_03G05910.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_03G05960.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.04 | OrthoFinder | |
| PTI_03G05970.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_04G00260.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_06G03610.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.1 | OrthoFinder | |
| PTI_08G00150.1 | No alias | Hypothetical protein | 0.03 | OrthoFinder | |
| PTI_09G00400.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.07 | OrthoFinder | |
| PTI_09G01520.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.05 | OrthoFinder | |
| PTI_09G02860.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.12 | OrthoFinder | |
| PTI_09G02870.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_10G01700.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_11G04470.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.11 | OrthoFinder | |
| PTI_15G00010.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.07 | OrthoFinder | |
| PTI_16G00080.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_16G00090.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.06 | OrthoFinder | |
| PTI_16G00100.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_16G02500.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_16G02510.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.09 | OrthoFinder | |
| PTI_17G00090.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.03 | OrthoFinder | |
| PTI_17G02300.1 | No alias | Hypothetical protein | 0.08 | OrthoFinder | |
| PTI_18G01250.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.07 | OrthoFinder | |
| PTI_18G02830.1 | No alias | Hypothetical protein | 0.08 | OrthoFinder | |
| PTI_18G02840.1 | No alias | Hypothetical protein | 0.11 | OrthoFinder | |
| PTI_19G03110.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.05 | OrthoFinder | |
| PTI_20G00030.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_20G00040.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_20G00050.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_20G00060.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.07 | OrthoFinder | |
| PTI_22G02660.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_24G00370.1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| PTI_24G01650.1 | No alias | Hypothetical protein | 0.1 | OrthoFinder | |
| PTI_25G00030.1 | No alias | Hypothetical protein | 0.04 | OrthoFinder | |
| PTI_27G00060.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.12 | OrthoFinder | |
| PTI_27G01660.1 | No alias | Hypothetical protein | 0.05 | OrthoFinder | |
| PTI_27G01670.1 | No alias | Hypothetical protein | 0.07 | OrthoFinder | |
| PTI_31G00950.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.07 | OrthoFinder | |
| PTI_31G00960.1 | No alias | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.13 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013103 | RVT_2 | 1307 | 1523 |
| No external refs found! |