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  5. OT_18G01720.1

OT_18G01720.1


Description : Ribosomal biogenesis, methyltransferase, EMG1/NEP1 [Interproscan].


Gene families : OG_01_0003982 (OrthoFinder) Phylogenetic Tree(s): OG0003982_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_18G01720.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Cre01.g009950 30788800, NEP1 No description available 0.07 OrthoFinder
Cz11g11170.t1 No alias Ribosomal biogenesis, methyltransferase, EMG1/NEP1... 0.04 OrthoFinder
EOD12343 No alias Ribosomal biogenesis, methyltransferase, EMG1/NEP1... 0.02 OrthoFinder
EOD39211 No alias Ribosomal biogenesis, methyltransferase, EMG1/NEP1... 0.02 OrthoFinder
PTI_06G01480.1 No alias Ribosomal biogenesis, methyltransferase, EMG1/NEP1... 0.03 OrthoFinder
Sro756_g197710.1 Contig3619.g27987 Small subunit methyltransferase NEP1 0.02 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44518.1_2328 PRW44518 Pre-rRNA processing 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008452 RNA ligase activity IEP Enrichment
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR005304 Rbsml_bgen_MeTrfase_EMG1/NEP1 22 218
No external refs found!