OT_17G01820.1


Description : U box domain; Ubiquitin conjugation factor E4, core [Interproscan].


Gene families : OG_01_0001482 (OrthoFinder) Phylogenetic Tree(s): OG0001482_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_17G01820.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000076.105 tig00000076_g2403.t1 Probable ubiquitin conjugation factor E4 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cz02g21330.t1 No alias U box domain; Ubiquitin conjugation factor E4, core... 0.02 OrthoFinder
Dusal.0043s00001.1 33199638 U box domain; Ubiquitin conjugation factor E4, core... 0.03 OrthoFinder
Dusal.1329s00001.1 33189699 Hypothetical protein 0.02 OrthoFinder
EOD22834 No alias Ubiquitin conjugation factor E4, core; U box domain... 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEA Interproscan
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Enrichment
CC GO:0000159 protein phosphatase type 2A complex IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003911 DNA ligase (NAD+) activity IEP Enrichment
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004517 nitric-oxide synthase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0005544 calcium-dependent phospholipid binding IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006809 nitric oxide biosynthetic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Enrichment
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0031124 mRNA 3'-end processing IEP Enrichment
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046209 nitric oxide metabolic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
CC GO:0071203 WASH complex IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
BP GO:2001057 reactive nitrogen species metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003613 Ubox_domain 910 980
IPR019474 Ub_conjug_fac_E4_core 246 893
No external refs found!