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  5. OT_17G00530.1

OT_17G00530.1


Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_17G00530.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Cre12.g544327 30791687 No description available 0.02 OrthoFinder
PTI_22G02070.1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_002508460.1 MICPUN_74929, 74929 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494124.1_3988 KAA8494124 E3 ubiquitin-protein ligase ATL9 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003951 NAD+ kinase activity IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016846 carbon-sulfur lyase activity IEP Enrichment
BP GO:0018142 protein-DNA covalent cross-linking IEP Enrichment
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 78 120
No external refs found!