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  5. OT_16G02830.1

OT_16G02830.1


Description : Regulator of chromosome condensation (RCC1) repeat; Regulator of chromosome condensation, RCC1 [Interproscan].


Gene families : OG_01_0000020 (OrthoFinder) Phylogenetic Tree(s): OG0000020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_16G02830.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Cz07g00140.t1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Cz14g02070.t1 No alias Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
Dusal.1192s00003.1 33203438 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
PTI_12G00160.1 No alias Regulator of chromosome condensation (RCC1) repeat;... 0.01 OrthoFinder
Transcript_contig_79616 79616 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
XM_003058490.1 MicpuC2_17539, 17539 Regulator of chromosome condensation, RCC1 [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000025.1_cds_PRW20195.1_5746 PRW20195 RCC2-like protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 228 286
IPR000408 Reg_chr_condens 179 217
No external refs found!