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  5. OT_16G01380.1

OT_16G01380.1


Description : Synaptotagmin, SMP domain; C2 domain [Interproscan].


Gene families : OG_01_0001539 (OrthoFinder) Phylogenetic Tree(s): OG0001539_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_16G01380.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Cre01.g044600 30789288 Synaptotagmin-2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cre01.g044650 30788681 Synaptotagmin-2 OS=Arabidopsis thaliana 0.02 OrthoFinder
Dusal.1289s00002.1 33194451 Synaptotagmin, SMP domain [Interproscan]. 0.01 OrthoFinder
Vocar.0001s0638.1 32885652 Synaptotagmin, SMP domain [Interproscan]. 0.02 OrthoFinder
Vocar.0001s0640.1 32885501 Synaptotagmin, SMP domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0004133 glycogen debranching enzyme activity IEP Enrichment
MF GO:0004134 4-alpha-glucanotransferase activity IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005544 calcium-dependent phospholipid binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005759 mitochondrial matrix IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006476 protein deacetylation IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015276 ligand-gated ion channel activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016575 histone deacetylation IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022834 ligand-gated channel activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030126 COPI vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
BP GO:0035601 protein deacylation IEP Enrichment
MF GO:0042162 telomeric DNA binding IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
MF GO:0043047 single-stranded telomeric DNA binding IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0098732 macromolecule deacylation IEP Enrichment
MF GO:0098847 sequence-specific single stranded DNA binding IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 420 599
IPR000008 C2_dom 630 736
IPR000008 C2_dom 777 905
No external refs found!