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  5. OT_16G01220.1

OT_16G01220.1


Description : Chorismate pyruvate-lyase Rv2949c-like [Interproscan].


Gene families : OG_01_0000163 (OrthoFinder) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_16G01220.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_55294 55294 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder
XM_002506527.1 MICPUN_73195, 73195 Chorismate pyruvate-lyase Rv2949c-like [Interproscan]. 0.03 OrthoFinder
XM_002508966.1 MICPUN_63159, 63159 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
InterPro domains Description Start Stop
IPR002800 Rv2949c-like 81 237
No external refs found!