Description : Pseudouridine synthase, RsuA/RluA [Interproscan].
Gene families : OG_01_0013849 (OrthoFinder) Phylogenetic Tree(s): OG0013849_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: OT_16G01020.1 | |
Cluster | HCCA: Cluster_42 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
XM_003060056.1 | MicpuC2_47718, 47718 | Pseudouridine synthase, RsuA/RluA [Interproscan]. | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEA | Interproscan |
MF | GO:0003723 | RNA binding | IEA | Interproscan |
BP | GO:0009451 | RNA modification | IEA | Interproscan |
MF | GO:0009982 | pseudouridine synthase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000702 | oxidized base lesion DNA N-glycosylase activity | IEP | Enrichment |
MF | GO:0003682 | chromatin binding | IEP | Enrichment |
MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
MF | GO:0004140 | dephospho-CoA kinase activity | IEP | Enrichment |
BP | GO:0006284 | base-excision repair | IEP | Enrichment |
BP | GO:0006289 | nucleotide-excision repair | IEP | Enrichment |
BP | GO:0006553 | lysine metabolic process | IEP | Enrichment |
BP | GO:0006914 | autophagy | IEP | Enrichment |
MF | GO:0008534 | oxidized purine nucleobase lesion DNA N-glycosylase activity | IEP | Enrichment |
MF | GO:0008839 | 4-hydroxy-tetrahydrodipicolinate reductase | IEP | Enrichment |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Enrichment |
BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Enrichment |
BP | GO:0009085 | lysine biosynthetic process | IEP | Enrichment |
BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Enrichment |
CC | GO:0015934 | large ribosomal subunit | IEP | Enrichment |
BP | GO:0015936 | coenzyme A metabolic process | IEP | Enrichment |
BP | GO:0015937 | coenzyme A biosynthetic process | IEP | Enrichment |
MF | GO:0016628 | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | IEP | Enrichment |
MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Enrichment |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Enrichment |
MF | GO:0019104 | DNA N-glycosylase activity | IEP | Enrichment |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Enrichment |
BP | GO:0033866 | nucleoside bisphosphate biosynthetic process | IEP | Enrichment |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Enrichment |
BP | GO:0034030 | ribonucleoside bisphosphate biosynthetic process | IEP | Enrichment |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Enrichment |
BP | GO:0034033 | purine nucleoside bisphosphate biosynthetic process | IEP | Enrichment |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Enrichment |
CC | GO:0044391 | ribosomal subunit | IEP | Enrichment |
BP | GO:0046451 | diaminopimelate metabolic process | IEP | Enrichment |
CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Enrichment |
BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Enrichment |
BP | GO:0071586 | CAAX-box protein processing | IEP | Enrichment |
CC | GO:1902554 | serine/threonine protein kinase complex | IEP | Enrichment |
CC | GO:1902911 | protein kinase complex | IEP | Enrichment |
CC | GO:1990316 | Atg1/ULK1 kinase complex | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006145 | PsdUridine_synth_RsuA/RluA | 134 | 320 |
No external refs found! |