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  5. OT_16G00020.1

OT_16G00020.1


Description : Strawberry notch, helicase C domain; Strawberry notch, AAA domain [Interproscan].


Gene families : OG_01_0000467 (OrthoFinder) Phylogenetic Tree(s): OG0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_16G00020.1
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
EOD07809 No alias Strawberry notch, AAA domain; Strawberry notch, helicase... 0.02 OrthoFinder
Transcript_contig_78647 78647 Strawberry notch, AAA domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP Enrichment
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
MF GO:0015923 mannosidase activity IEP Enrichment
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment
InterPro domains Description Start Stop
IPR026937 SBNO_Helicase_C_dom 546 861
IPR039187 SNO_AAA 59 361
No external refs found!