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Description : RNA recognition motif domain [Interproscan].
Gene families : OG_01_0003089 (OrthoFinder) Phylogenetic Tree(s): OG0003089_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: OT_14G01040.1 | |
| Cluster | HCCA: Cluster_56 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021682.8 | tig00021682_g23098.t1 | Nuclear cap-binding protein subunit 2 OS=Oryza sativa... | 0.02 | OrthoFinder | |
| Cre10.g437850 | 30790832 | RNA processing.RNA 5-end cap adding.CBP80-CBP20 mRNA... | 0.04 | OrthoFinder | |
| Cz06g13270.t1 | No alias | RNA recognition motif domain [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000350 | generation of catalytic spliceosome for second transesterification step | IEP | Enrichment |
| MF | GO:0004358 | glutamate N-acetyltransferase activity | IEP | Enrichment |
| MF | GO:0004525 | ribonuclease III activity | IEP | Enrichment |
| MF | GO:0004659 | prenyltransferase activity | IEP | Enrichment |
| MF | GO:0004797 | thymidine kinase activity | IEP | Enrichment |
| CC | GO:0005681 | spliceosomal complex | IEP | Enrichment |
| CC | GO:0005744 | TIM23 mitochondrial import inner membrane translocase complex | IEP | Enrichment |
| BP | GO:0006525 | arginine metabolic process | IEP | Enrichment |
| BP | GO:0006526 | arginine biosynthetic process | IEP | Enrichment |
| BP | GO:0006839 | mitochondrial transport | IEP | Enrichment |
| MF | GO:0008318 | protein prenyltransferase activity | IEP | Enrichment |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0018342 | protein prenylation | IEP | Enrichment |
| MF | GO:0019136 | deoxynucleoside kinase activity | IEP | Enrichment |
| MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Enrichment |
| MF | GO:0019206 | nucleoside kinase activity | IEP | Enrichment |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Enrichment |
| BP | GO:0030150 | protein import into mitochondrial matrix | IEP | Enrichment |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
| BP | GO:0044743 | protein transmembrane import into intracellular organelle | IEP | Enrichment |
| BP | GO:0065002 | intracellular protein transmembrane transport | IEP | Enrichment |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0070585 | protein localization to mitochondrion | IEP | Enrichment |
| BP | GO:0071806 | protein transmembrane transport | IEP | Enrichment |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Enrichment |
| BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | Enrichment |
| BP | GO:0097354 | prenylation | IEP | Enrichment |
| BP | GO:1990542 | mitochondrial transmembrane transport | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 36 | 106 |
| No external refs found! |