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  5. OT_14G00750.1

OT_14G00750.1


Description : K Homology domain, type 2; GTP binding domain [Interproscan].


Gene families : OG_01_0000997 (OrthoFinder) Phylogenetic Tree(s): OG0000997_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_14G00750.1
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cre02.g141706 30785085 GTPase ERA1, chloroplastic OS=Zea mays 0.02 OrthoFinder
Dusal.0316s00010.1 33189586 K Homology domain, type 2; GTP binding domain [Interproscan]. 0.02 OrthoFinder
EOD15337 No alias GTP binding domain [Interproscan]. 0.02 OrthoFinder
PTI_15G00360.1 No alias K Homology domain, type 2; GTP binding domain [Interproscan]. 0.02 OrthoFinder
Sro1947_g307140.1 Contig4111.g31365 GTPase ERA 0.04 OrthoFinder
Sro680_g186170.1 Contig3657.g28231 GTPase ERA 0.03 OrthoFinder
Transcript_contig_3804 3804 K Homology domain, type 2 [Interproscan]. 0.02 OrthoFinder
XM_002505561.1 MICPUN_68903, 68903 K Homology domain, type 2 [Interproscan]. 0.08 OrthoFinder
XM_003058380.1 MicpuC2_17460, 17460 K Homology domain, type 2 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01001188.1_cds_GFH17703.1_12180 HaLaN_14390, GFH17703 Era-type G domain-containing protein 0.04 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56483.1_9781 PRW56483 GTPase Era 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495901.1_1899 KAA8495901 GTP-binding protein ERG 0.02 OrthoFinder
lcl|VRMN01000007.1_cds_KAA8493382.1_9683 KAA8493382 GTPase Era 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003724 RNA helicase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004518 nuclease activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 115 207
IPR004044 KH_dom_type_2 313 391
No external refs found!