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  5. OT_13G02410.1

OT_13G02410.1


Description : WD40 repeat [Interproscan].


Gene families : OG_01_0000709 (OrthoFinder) Phylogenetic Tree(s): OG0000709_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_13G02410.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
XM_003058735.1 MicpuC2_45511, 45511 Anaphase-promoting complex subunit 4, WD40 domain; WD40... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Enrichment
MF GO:0000213 tRNA-intron endonuclease activity IEP Enrichment
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP Enrichment
MF GO:0003684 damaged DNA binding IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Enrichment
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Enrichment
BP GO:0006914 autophagy IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0019104 DNA N-glycosylase activity IEP Enrichment
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0043545 molybdopterin cofactor metabolic process IEP Enrichment
BP GO:0051189 prosthetic group metabolic process IEP Enrichment
BP GO:0051259 protein complex oligomerization IEP Enrichment
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Enrichment
BP GO:0061919 process utilizing autophagic mechanism IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1902554 serine/threonine protein kinase complex IEP Enrichment
CC GO:1902911 protein kinase complex IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
CC GO:1990316 Atg1/ULK1 kinase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 389 424
IPR001680 WD40_repeat 473 509
IPR001680 WD40_repeat 347 379
No external refs found!