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  5. OT_13G01670.1

OT_13G01670.1


Description : Transcription factor TFIIB, cyclin-like domain; Brf1, TBP-binding domain [Interproscan].


Gene families : OG_01_0002221 (OrthoFinder) Phylogenetic Tree(s): OG0002221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_13G01670.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Dusal.0164s00005.1 33198376 Transcription factor TFIIB, cyclin-like domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_55015 55015 Transcription factor TFIIB, cyclin-like domain [Interproscan]. 0.03 OrthoFinder
XM_002502791.1 MICPUN_82380, 82380 Brf1, TBP-binding domain; Transcription factor TFIIB,... 0.03 OrthoFinder
lcl|BLLF01003386.1_cds_GFH27199.1_21676 HaLaN_25481, GFH27199 Transcription factor TFIIB, cyclin-like domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05810.1_5983 PRW05810 Transcription factor IIIB 90 kDa subunit 0.02 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493839.1_4601 KAA8493839 Transcription factor IIIB 90 kDa subunit 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0017025 TBP-class protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Enrichment
MF GO:0003989 acetyl-CoA carboxylase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006166 purine ribonucleoside salvage IEP Enrichment
BP GO:0006190 inosine salvage IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0007031 peroxisome organization IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008252 nucleotidase activity IEP Enrichment
MF GO:0008253 5'-nucleotidase activity IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0009119 ribonucleoside metabolic process IEP Enrichment
BP GO:0009163 nucleoside biosynthetic process IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
MF GO:0016421 CoA carboxylase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
BP GO:0042278 purine nucleoside metabolic process IEP Enrichment
BP GO:0042451 purine nucleoside biosynthetic process IEP Enrichment
BP GO:0042455 ribonucleoside biosynthetic process IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
BP GO:0043094 cellular metabolic compound salvage IEP Enrichment
BP GO:0043101 purine-containing compound salvage IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0043174 nucleoside salvage IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0046102 inosine metabolic process IEP Enrichment
BP GO:0046103 inosine biosynthetic process IEP Enrichment
BP GO:0046128 purine ribonucleoside metabolic process IEP Enrichment
BP GO:0046129 purine ribonucleoside biosynthetic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
MF GO:0050483 IMP 5'-nucleotidase activity IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901659 glycosyl compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR011665 BRF1_TBP-bd_dom 566 658
IPR013150 TFIIB_cyclin 97 166
IPR013150 TFIIB_cyclin 198 271
No external refs found!