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  5. OT_10G01980.1

OT_10G01980.1


Description : Ribosomal protein L31e [Interproscan].


Gene families : OG_01_0003819 (OrthoFinder) Phylogenetic Tree(s): OG0003819_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_10G01980.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020703.20 tig00020703_g13122.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.19 OrthoFinder
Cre12.g489153 30793408 Protein biosynthesis.cytosolic ribosome.large subunit... 0.2 OrthoFinder
Cz10g20060.t1 No alias Ribosomal protein L31e [Interproscan]. 0.16 OrthoFinder
Dusal.0029s00041.1 33203765 Ribosomal protein L31e [Interproscan]. 0.09 OrthoFinder
EOD14536 No alias Ribosomal protein L31e [Interproscan]. 0.1 OrthoFinder
EOD38942 No alias Ribosomal protein L31e [Interproscan]. 0.1 OrthoFinder
PTI_07G02120.1 No alias Ribosomal protein L31e [Interproscan]. 0.12 OrthoFinder
Sro1684_g291000.1 Contig2811.g22545 60S ribosomal protein L31 0.28 OrthoFinder
TP02G04920.1 No alias Ribosomal protein L31e [Interproscan]. 0.25 OrthoFinder
Vocar.0016s0109.1 32897984 Ribosomal protein L31e [Interproscan]. 0.09 OrthoFinder
XM_003055597.1 MicpuC2_24390, 24390 Ribosomal protein L31e [Interproscan]. 0.11 OrthoFinder
lcl|BLLF01004002.1_cds_GFH28711.1_23188 HaLaN_27249, GFH28711 Ribosomal protein L31e [Interproscan]. 0.04 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05819.1_6025 PRW05819 60S ribosomal L31 0.15 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493621.1_4383 KAA8493621 60S ribosomal protein L31 0.14 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004619 phosphoglycerate mutase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006007 glucose catabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016125 sterol metabolic process IEP Enrichment
BP GO:0016126 sterol biosynthetic process IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019320 hexose catabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046365 monosaccharide catabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000054 Ribosomal_L31e 9 89
No external refs found!