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  5. OT_09G03030.1

OT_09G03030.1


Description : Helicase, C-terminal; DEAD/DEAH box helicase domain; Exonuclease, RNase T/DNA polymerase III [Interproscan].


Gene families : OG_01_0001341 (OrthoFinder) Phylogenetic Tree(s): OG0001341_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_09G03030.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Vocar.0045s0043.1 32887754 DEAD/DEAH box helicase domain; Helicase, C-terminal;... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Enrichment
CC GO:0000159 protein phosphatase type 2A complex IEP Enrichment
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004517 nitric-oxide synthase activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005759 mitochondrial matrix IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006658 phosphatidylserine metabolic process IEP Enrichment
BP GO:0006659 phosphatidylserine biosynthetic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006809 nitric oxide biosynthetic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006887 exocytosis IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016482 cytosolic transport IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0022853 active ion transmembrane transporter activity IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030906 retromer, cargo-selective complex IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Enrichment
BP GO:0042147 retrograde transport, endosome to Golgi IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
BP GO:0045017 glycerolipid biosynthetic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046209 nitric oxide metabolic process IEP Enrichment
BP GO:0046474 glycerophospholipid biosynthetic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
CC GO:0071203 WASH complex IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0099023 vesicle tethering complex IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
BP GO:2001057 reactive nitrogen species metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013520 Exonuclease_RNaseT/DNA_pol3 221 394
IPR001650 Helicase_C 1042 1155
IPR011545 DEAD/DEAH_box_helicase_dom 836 998
No external refs found!