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  5. OT_08G02610.1

OT_08G02610.1


Description : Chaperonin Cpn60/TCP-1 family [Interproscan].


Gene families : OG_01_0003436 (OrthoFinder) Phylogenetic Tree(s): OG0003436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_08G02610.1
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020903.30 tig00020903_g15096.t1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder
Cre09.g416750 30781340, CCT2 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.09 OrthoFinder
Cz12g27040.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
Dusal.0437s00014.1 33198276 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
EOD03984 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.07 OrthoFinder
EOD34861 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.07 OrthoFinder
Sro2362_g324860.1 Contig1769.g15640 Thermosome subunit beta (Fragment) 0.08 OrthoFinder
TP04G07770.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.02 OrthoFinder
Vocar.0011s0268.1 32895339 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
XM_002508232.1 MICPUN_108805, 108805 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
XM_003058918.1 MicpuC2_45559, 45559 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01000191.1_cds_GFH08872.1_3349 HaLaN_03911, GFH08872 T-complex 1 subunit beta 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
MF GO:0070566 adenylyltransferase activity IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 37 524
No external refs found!