1. Home
  2. Species
  3. Ostreococcus tauri
  4. Sequence
  5. OT_07G03930.1

OT_07G03930.1


Description : Polyadenylate-binding protein/Hyperplastic disc protein; RNA recognition motif domain [Interproscan].


Gene families : OG_01_0000841 (OrthoFinder) Phylogenetic Tree(s): OG0000841_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_07G03930.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cre01.g039300 30789032 Protein biosynthesis.translation initiation.mRNA... 0.03 OrthoFinder
EOD08314 No alias RNA recognition motif domain; Polyadenylate-binding... 0.02 OrthoFinder
PTI_28G01450.1 No alias RNA recognition motif domain; Polyadenylate-binding... 0.03 OrthoFinder
Sro1157_g247340.1 Contig443.g5944 Polyadenylate-binding protein, cytoplasmic and nuclear 0.03 OrthoFinder
XM_003055503.1 MicpuC2_46263, 46263 RNA recognition motif domain; Polyadenylate-binding... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008170 N-methyltransferase activity IEP Enrichment
MF GO:0008175 tRNA methyltransferase activity IEP Enrichment
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0031072 heat shock protein binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
InterPro domains Description Start Stop
IPR002004 PABP_HYD 525 591
IPR000504 RRM_dom 122 190
IPR000504 RRM_dom 315 383
IPR000504 RRM_dom 34 104
IPR000504 RRM_dom 212 280
No external refs found!