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  5. OT_07G03850.1

OT_07G03850.1


Description : WD40 repeat [Interproscan].


Gene families : OG_01_0003330 (OrthoFinder) Phylogenetic Tree(s): OG0003330_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_07G03850.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Cre03.g205800 30787098 No description available 0.02 OrthoFinder
PTI_12G03680.1 No alias WD40 repeat [Interproscan]. 0.02 OrthoFinder
Sro154_g069920.1 Contig2716.g21870 P21-activated protein kinase-interacting protein 1-like 0.02 OrthoFinder
TP05G03650.1 No alias WD40 repeat [Interproscan]. 0.03 OrthoFinder
Vocar.0047s0009.1 32899290 WD40 repeat [Interproscan]. 0.03 OrthoFinder
XM_002503888.1 MICPUN_60045, 60045 WD40 repeat [Interproscan]. 0.02 OrthoFinder
XM_003054961.1 MicpuC2_50307, 50307 WD40 repeat [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60702.1_4697 PRW60702 P21-activated kinase-interacting 1-like 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0032040 small-subunit processome IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 78 117
IPR001680 WD40_repeat 124 160
No external refs found!