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  5. OT_07G00770.1

OT_07G00770.1


Description : Small GTPase [Interproscan].


Gene families : OG_01_0000215 (OrthoFinder) Phylogenetic Tree(s): OG0000215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_07G00770.1
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000455.18 tig00000455_g1006.t1 Ras-related protein RABD2c OS=Arabidopsis thaliana 0.01 OrthoFinder
Cpa|evm.model.tig00000455.19 tig00000455_g1007.t1 Ras-related protein RABD2c OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00000983.30 tig00000983_g5919.t1 Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder
Cpa|evm.model.tig00001408.10 tig00001408_g8605.t1 Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder
Cre12.g560150 30793394 Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder
Cz06g05150.t1 No alias Small GTPase [Interproscan]. 0.02 OrthoFinder
EOD04048 No alias Rab family GTPase [Ensembl]. 0.02 OrthoFinder
EOD34679 No alias Ras-related protein [Ensembl]. 0.02 OrthoFinder
EOD40734 No alias Rab8, rab family GTPase [Ensembl]. 0.02 OrthoFinder
TP03G05300.1 No alias Small GTPase [Interproscan]. 0.01 OrthoFinder
UNPLg00112.t1 No alias Small GTPase [Interproscan]. 0.02 OrthoFinder
XM_003055674.1 MicpuC2_31102, 31102 Small GTPase [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60039.1_6259 PRW60039 Rab family GTPase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003964 RNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0015078 proton transmembrane transporter activity IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 170
No external refs found!