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  5. OT_06G02390.1

OT_06G02390.1


Description : Symplekin/Pta1, N-terminal; Symplekin C-terminal [Interproscan].


Gene families : OG_01_0002970 (OrthoFinder) Phylogenetic Tree(s): OG0002970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_06G02390.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Cz03g09030.t1 No alias Symplekin/Pta1, N-terminal; Symplekin C-terminal [Interproscan]. 0.02 OrthoFinder
EOD29249 No alias Symplekin C-terminal [Interproscan]. 0.02 OrthoFinder
PTI_02G06910.1 No alias Symplekin C-terminal; Symplekin/Pta1, N-terminal [Interproscan]. 0.02 OrthoFinder
Sro759_g198240.1 Contig608.g7524 Symplekin 0.02 OrthoFinder
XM_002508068.1 MICPUN_60517, 60517 Symplekin/Pta1, N-terminal; Symplekin C-terminal [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01006755.1_cds_GFH32529.1_27006 HaLaN_31763, GFH32529 DUF3453 domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004325 ferrochelatase activity IEP Enrichment
CC GO:0005801 cis-Golgi network IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006904 vesicle docking involved in exocytosis IEP Enrichment
BP GO:0006913 nucleocytoplasmic transport IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
BP GO:0022406 membrane docking IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0048278 vesicle docking IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051169 nuclear transport IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:0051640 organelle localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0140029 exocytic process IEP Enrichment
BP GO:0140056 organelle localization by membrane tethering IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR022075 Symplekin_C 890 1068
IPR032460 Symplekin/Pta1_N 154 317
No external refs found!