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  5. OT_05G03610.1

OT_05G03610.1


Description : Squalene/phytoene synthase [Interproscan].


Gene families : OG_01_0001265 (OrthoFinder) Phylogenetic Tree(s): OG0001265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_05G03610.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cre02.g095092 30785417, PSY1 Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder
Cz05g32220.t1 No alias Squalene/phytoene synthase [Interproscan]. 0.05 OrthoFinder
Cz05g32230.t1 No alias Squalene/phytoene synthase [Interproscan]. 0.04 OrthoFinder
Dusal.0943s00001.1 33203020 Squalene/phytoene synthase [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56701 56701 Squalene/phytoene synthase [Interproscan]. 0.03 OrthoFinder
Vocar.0027s0175.1 32887239 Squalene/phytoene synthase [Interproscan]. 0.03 OrthoFinder
XM_002508472.1 MICPUN_85839, 85839 Phytoene synthase (PSY1) 0.04 OrthoFinder
lcl|VRMN01000015.1_cds_KAA8491175.1_5803 KAA8491175 All-trans-phytoene synthase 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Enrichment
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
MF GO:0004673 protein histidine kinase activity IEP Enrichment
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Enrichment
BP GO:0007165 signal transduction IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Enrichment
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Enrichment
BP GO:0035556 intracellular signal transduction IEP Enrichment
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Enrichment
MF GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0052646 alditol phosphate metabolic process IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0061630 ubiquitin protein ligase activity IEP Enrichment
MF GO:0061659 ubiquitin-like protein ligase activity IEP Enrichment
MF GO:0140299 small molecule sensor activity IEP Enrichment
BP GO:1901136 carbohydrate derivative catabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!