Description : Chlorophyll A-B binding protein [Interproscan].
Gene families : OG_01_0000076 (OrthoFinder) Phylogenetic Tree(s): OG0000076_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: OT_05G01810.1 | |
Cluster | HCCA: Cluster_47 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre08.g365900 | 30773702, LHCSR1 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder | |
Cz16g02040.t1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
EOD07752 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.03 | OrthoFinder | |
EOD08157 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
EOD18950 | No alias | Light harvesting protein [Ensembl]. | 0.03 | OrthoFinder | |
EOD26056 | No alias | Light harvesting protein [Ensembl]. | 0.02 | OrthoFinder | |
PTI_02G04020.1 | No alias | Chlorophyll A-B binding protein [Interproscan]. | 0.02 | OrthoFinder | |
Sro101_g051590.1 | Contig348.g4712 | Fucoxanthin-chlorophyll a-c binding protein | 0.02 | OrthoFinder | |
Sro1151_g246800.1 | Contig4710.g35031 | Chloroplastic | 0.02 | OrthoFinder | |
Sro1207_g252450.1 | Contig242.g2948 | B binding protein L1818, chloroplastic | 0.01 | OrthoFinder | |
Sro234_g094380.1 | Contig3223.g25485 | Fucoxanthin-chlorophyll a-c binding protein | 0.02 | OrthoFinder | |
Sro263_g102180.1 | Contig612.g7540 | Fucoxanthin-chlorophyll a-c binding protein A, chloroplastic | 0.02 | OrthoFinder | |
Sro453_g146050.1 | Contig1693.g15162 | B binding protein CP29 | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0001671 | ATPase activator activity | IEP | Enrichment |
MF | GO:0004427 | inorganic diphosphatase activity | IEP | Enrichment |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Enrichment |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
MF | GO:0009055 | electron transfer activity | IEP | Enrichment |
MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | Enrichment |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
BP | GO:0010207 | photosystem II assembly | IEP | Enrichment |
BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:0015979 | photosynthesis | IEP | Enrichment |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
MF | GO:0051087 | chaperone binding | IEP | Enrichment |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
MF | GO:0060590 | ATPase regulator activity | IEP | Enrichment |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022796 | Chloroa_b-bind | 43 | 199 |
No external refs found! |