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  5. OT_04G02130.1

OT_04G02130.1


Description : Exoribonuclease, phosphorolytic domain 1 [Interproscan].


Gene families : OG_01_0000382 (OrthoFinder) Phylogenetic Tree(s): OG0000382_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_04G02130.1
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
Cre17.g697624 30781907 RNA processing.RNA decay.exosome complex.EXO9 core... 0.03 OrthoFinder
Cz07g33030.t1 No alias Exoribonuclease, phosphorolytic domain 1 [Interproscan]. 0.03 OrthoFinder
EOD24655 No alias Exoribonuclease, phosphorolytic domain 1 [Interproscan]. 0.02 OrthoFinder
PTI_28G01470.1 No alias Exoribonuclease, phosphorolytic domain 1 [Interproscan]. 0.02 OrthoFinder
Sro2148_g316530.1 Contig3130.g24839 Complex component RRP41 0.02 OrthoFinder
Sro3366_g347270.1 Contig2665.g21560 Complex component MTR3 0.03 OrthoFinder
TP05G04060.1 No alias Exoribonuclease, phosphorolytic domain 1 [Interproscan]. 0.02 OrthoFinder
Vocar.0005s0487.1 32883546 Exoribonuclease, phosphorolytic domain 1 [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000608.1_cds_GFH13408.1_7885 HaLaN_09286, GFH13408 Exoribonuclease, phosphorolytic domain 1 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Enrichment
MF GO:0004519 endonuclease activity IEP Enrichment
MF GO:0004521 endoribonuclease activity IEP Enrichment
MF GO:0004526 ribonuclease P activity IEP Enrichment
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
BP GO:0030490 maturation of SSU-rRNA IEP Enrichment
CC GO:0030684 preribosome IEP Enrichment
CC GO:0030686 90S preribosome IEP Enrichment
CC GO:0030688 preribosome, small subunit precursor IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
InterPro domains Description Start Stop
IPR001247 ExoRNase_PH_dom1 15 154
No external refs found!