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  5. OT_04G00410.1

OT_04G00410.1


Description : Aminoacyl-tRNA synthetase, class Ia; Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding; Zinc finger, FPG/IleRS-type [Interproscan].


Gene families : OG_01_0002127 (OrthoFinder) Phylogenetic Tree(s): OG0002127_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_04G00410.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000630.10 tig00000630_g2688.t1 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder
Cre16.g689871 30777522 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 OrthoFinder
Cz12g01180.t1 No alias Aminoacyl-tRNA synthetase, class Ia; Zinc finger,... 0.05 OrthoFinder
EOD17348 No alias Putative mitochondrial isoleucine tRNA synthetase [Ensembl]. 0.04 OrthoFinder
PTI_01G00760.1 No alias Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,... 0.02 OrthoFinder
Sro1081_g239040.1 Contig4556.g34022 Isoleucine--tRNA ligase, mitochondrial (Fragment) 0.03 OrthoFinder
TP01G06840.1 No alias Aminoacyl-tRNA synthetase, class Ia;... 0.03 OrthoFinder
XM_002504704.1 MICPUN_97914, 97914 Zinc finger, FPG/IleRS-type; Aminoacyl-tRNA synthetase,... 0.08 OrthoFinder
XM_003064595.1 MicpuC2_46060, 46060 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase,... 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61547.1_195 PRW61547 Isoleucyl-tRNA synthetase 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0031369 translation initiation factor binding IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002300 aa-tRNA-synth_Ia 121 743
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 787 944
IPR010663 Znf_FPG/IleRS 1011 1039
No external refs found!