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  5. OT_03G05430.1

OT_03G05430.1


Description : MnmE, helical domain; GTP-binding protein TrmE, N-terminal; GTP binding domain [Interproscan].


Gene families : OG_01_0001602 (OrthoFinder) Phylogenetic Tree(s): OG0001602_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_03G05430.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_6775 6775 GTP-binding protein TrmE, N-terminal [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003856 3-dehydroquinate synthase activity IEP Enrichment
MF GO:0005048 signal sequence binding IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006810 transport IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0009072 aromatic amino acid family metabolic process IEP Enrichment
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Enrichment
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Enrichment
MF GO:0016972 thiol oxidase activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0042277 peptide binding IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
InterPro domains Description Start Stop
IPR006073 GTP-bd 248 364
IPR025867 MnmE_helical 150 493
IPR018948 GTP-bd_TrmE_N 15 147
No external refs found!