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  5. OT_03G03560.1

OT_03G03560.1


Description : Chaperonin Cpn60/TCP-1 family [Interproscan].


Gene families : OG_01_0002693 (OrthoFinder) Phylogenetic Tree(s): OG0002693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_03G03560.1
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000157.20 tig00000157_g9607.t1 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder
Cre03.g168450 30788210, CCT8 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder
Cz01g25210.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
Cz01g25220.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.07 OrthoFinder
EOD37191 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
Sro163_g073140.1 Contig1793.g15847 Complex protein 1 subunit theta 0.06 OrthoFinder
TP06G04660.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Transcript_contig_54448 54448 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Vocar.0040s0089.1 32886233 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.04 OrthoFinder
XM_002499420.1 MICPUN_104761, 104761 TCP-1/cpn60 chaperonin family protein (TCP-1) 0.05 OrthoFinder
XM_003055695.1 MicpuC2_31125, 31125 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000604.1_cds_GFH13366.1_7843 HaLaN_09237, GFH13366 Chaperonin complex component 0.03 OrthoFinder
lcl|BLLF01000604.1_cds_GFH13367.1_7844 HaLaN_09238, GFH13367 Chaperonin complex component 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56475.1_9784 PRW56475 T-complex 1 subunit theta 0.03 OrthoFinder
lcl|VRMN01000011.1_cds_KAA8491814.1_4822 KAA8491814 T-complex protein 1 subunit theta 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
BP GO:0006144 purine nucleobase metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0007062 sister chromatid cohesion IEP Enrichment
BP GO:0007064 mitotic sister chromatid cohesion IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009113 purine nucleobase biosynthetic process IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0031390 Ctf18 RFC-like complex IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 37 529
No external refs found!