Description : 40S ribosomal protein SA, C-terminal domain; Ribosomal protein S2 [Interproscan].
Gene families : OG_01_0002089 (OrthoFinder) Phylogenetic Tree(s): OG0002089_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: OT_03G03280.1 | |
Cluster | HCCA: Cluster_6 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre10.g432800 | 30790737, RPSa | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.06 | OrthoFinder | |
Cz04g36090.t1 | No alias | Ribosomal protein S2 [Interproscan]. | 0.07 | OrthoFinder | |
Dusal.0160s00027.1 | 33188334 | Ribosomal protein S2 [Interproscan]. | 0.12 | OrthoFinder | |
EOD15394 | No alias | 40S ribosomal protein SA, C-terminal domain; Ribosomal... | 0.07 | OrthoFinder | |
PTI_12G01500.1 | No alias | Ribosomal protein S2 [Interproscan]. | 0.14 | OrthoFinder | |
Sro120_g058380.1 | Contig2411.g19716 | 40S ribosomal protein SA | 0.18 | OrthoFinder | |
SymbC1.scaffold3021.4 | 3021.4 | Ribosomal protein S2 [Interproscan]. | 0.02 | OrthoFinder | |
TP03G06220.1 | No alias | Ribosomal protein S2 [Interproscan]. | 0.13 | OrthoFinder | |
Transcript_contig_79177 | 79177 | Ribosomal protein S2 [Interproscan]. | 0.05 | OrthoFinder | |
Vocar.0008s0458.1 | 32897164 | Ribosomal protein S2 [Interproscan]. | 0.03 | OrthoFinder | |
XM_003055196.1 | MicpuC2_13384, 13384 | Ribosomal protein S2 [Interproscan]. | 0.11 | OrthoFinder | |
lcl|LHPG02000015.1_cds_PRW33794.1_3017 | PRW33794 | 40S ribosomal SA-like | 0.05 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8499119.1_8072 | KAA8499119 | 40S ribosomal protein SA | 0.11 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
MF | GO:0003723 | RNA binding | IEP | Enrichment |
MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
MF | GO:0004779 | sulfate adenylyltransferase activity | IEP | Enrichment |
MF | GO:0004781 | sulfate adenylyltransferase (ATP) activity | IEP | Enrichment |
MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Enrichment |
CC | GO:0005737 | cytoplasm | IEP | Enrichment |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Enrichment |
BP | GO:0006082 | organic acid metabolic process | IEP | Enrichment |
BP | GO:0006399 | tRNA metabolic process | IEP | Enrichment |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Enrichment |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Enrichment |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Enrichment |
MF | GO:0016874 | ligase activity | IEP | Enrichment |
MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Enrichment |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Enrichment |
BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
BP | GO:0043038 | amino acid activation | IEP | Enrichment |
BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
BP | GO:0043436 | oxoacid metabolic process | IEP | Enrichment |
MF | GO:0045182 | translation regulator activity | IEP | Enrichment |
MF | GO:0070566 | adenylyltransferase activity | IEP | Enrichment |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Enrichment |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Enrichment |
No external refs found! |