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  5. OT_02G04150.1

OT_02G04150.1


Description : Ribosomal protein L15e [Interproscan].


Gene families : OG_01_0002964 (OrthoFinder) Phylogenetic Tree(s): OG0002964_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_02G04150.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000310.75 tig00000310_g24000.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 OrthoFinder
Cre02.g091100 30785346, RPL15 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder
Cz06g21030.t1 No alias Ribosomal protein L15e [Interproscan]. 0.1 OrthoFinder
Cz06g21040.t1 No alias Ribosomal protein L15e [Interproscan]. 0.08 OrthoFinder
Dusal.0088s00017.1 33203549 Ribosomal protein L15e [Interproscan]. 0.03 OrthoFinder
PTI_03G02920.1 No alias Ribosomal protein L15e [Interproscan]. 0.1 OrthoFinder
Sro827_g207900.1 Contig2896.g23095 60S ribosomal protein L15 0.12 OrthoFinder
TP01G10080.1 No alias Ribosomal protein L15e [Interproscan]. 0.07 OrthoFinder
Transcript_contig_90471 90471 Ribosomal protein L15e [Interproscan]. 0.03 OrthoFinder
Vocar.0001s1207.1 32885443 Ribosomal protein L15e [Interproscan]. 0.07 OrthoFinder
XM_002507599.1 MICPUN_55312, 55312 Ribosomal protein L15e [Interproscan]. 0.08 OrthoFinder
lcl|LHPG02000003.1_cds_PRW60132.1_6528 PRW60132 60S ribosomal L15 0.06 OrthoFinder
lcl|VRMN01000005.1_cds_KAA8494151.1_4015 KAA8494151 60S ribosomal protein L15 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0004526 ribonuclease P activity IEP Enrichment
MF GO:0004549 tRNA-specific ribonuclease activity IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
BP GO:0006839 mitochondrial transport IEP Enrichment
BP GO:0006848 pyruvate transport IEP Enrichment
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
BP GO:0015711 organic anion transport IEP Enrichment
BP GO:0015718 monocarboxylic acid transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
BP GO:0046942 carboxylic acid transport IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
BP GO:0098656 anion transmembrane transport IEP Enrichment
BP GO:1901475 pyruvate transmembrane transport IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
BP GO:1990542 mitochondrial transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR000439 Ribosomal_L15e 2 190
No external refs found!