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  5. OT_02G03350.1

OT_02G03350.1


Description : Condensin complex subunit 1, N-terminal; Condensin complex subunit 1, C-terminal [Interproscan].


Gene families : OG_01_0002505 (OrthoFinder) Phylogenetic Tree(s): OG0002505_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_02G03350.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021070.118 tig00021070_g17937.t1 Cell cycle.mitosis and meiosis.chromatin... 0.07 OrthoFinder
Cpa|evm.model.tig00021070.119 tig00021070_g17937.t1 Cell cycle.mitosis and meiosis.chromatin... 0.05 OrthoFinder
Cre10.g432500 30790146 Cell cycle.mitosis and meiosis.chromatin... 0.03 OrthoFinder
Cz14g02010.t1 No alias Condensin complex subunit 1, C-terminal; Condensin... 0.03 OrthoFinder
PTI_03G02490.1 No alias Condensin complex subunit 1, C-terminal [Interproscan]. 0.05 OrthoFinder
Sro359_g126130.1 Contig295.g3874 Condensin complex subunit 1 0.05 OrthoFinder
TP01G04990.1 No alias Condensin complex subunit 1, N-terminal; Condensin... 0.04 OrthoFinder
Transcript_contig_89360 89360 Condensin complex subunit 1, N-terminal [Interproscan]. 0.02 OrthoFinder
XM_002502382.1 MICPUN_81844, 81844 Condensin complex component, non-smc subunit 0.07 OrthoFinder
XM_003056956.1 MicpuC2_56701, 56701 Condensin complex component, non-smc subunit 0.03 OrthoFinder
lcl|BLLF01000075.1_cds_GFH07120.1_1597 HaLaN_01877, GFH07120 Condensin complex subunit 1, C-terminal [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01004974.1_cds_GFH30540.1_25017 HaLaN_29414, GFH30540 Hypothetical protein 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495990.1_1988 KAA8495990 Condensin complex subunit 1 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000278 mitotic cell cycle IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0004556 alpha-amylase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004797 thymidine kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
BP GO:0007049 cell cycle IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR032682 Cnd1_C 956 1123
IPR024324 Condensin_cplx_su1_N 87 248
No external refs found!