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Description : Spt4/RpoE2 zinc finger [Interproscan].
Gene families : OG_01_0002398 (OrthoFinder) Phylogenetic Tree(s): OG0002398_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: OT_02G01210.1 | |
| Cluster | HCCA: Cluster_58 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| EOD37623 | No alias | Spt4/RpoE2 zinc finger [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Enrichment |
| MF | GO:0005048 | signal sequence binding | IEP | Enrichment |
| CC | GO:0005672 | transcription factor TFIIA complex | IEP | Enrichment |
| BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Enrichment |
| BP | GO:0006621 | protein retention in ER lumen | IEP | Enrichment |
| BP | GO:0006743 | ubiquinone metabolic process | IEP | Enrichment |
| BP | GO:0006744 | ubiquinone biosynthetic process | IEP | Enrichment |
| MF | GO:0008199 | ferric iron binding | IEP | Enrichment |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Enrichment |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Enrichment |
| BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Enrichment |
| MF | GO:0030515 | snoRNA binding | IEP | Enrichment |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Enrichment |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | Enrichment |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0042180 | cellular ketone metabolic process | IEP | Enrichment |
| BP | GO:0042181 | ketone biosynthetic process | IEP | Enrichment |
| BP | GO:0042255 | ribosome assembly | IEP | Enrichment |
| BP | GO:0042256 | mature ribosome assembly | IEP | Enrichment |
| MF | GO:0042277 | peptide binding | IEP | Enrichment |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Enrichment |
| MF | GO:0043022 | ribosome binding | IEP | Enrichment |
| MF | GO:0044877 | protein-containing complex binding | IEP | Enrichment |
| BP | GO:0045185 | maintenance of protein location | IEP | Enrichment |
| MF | GO:0046923 | ER retention sequence binding | IEP | Enrichment |
| BP | GO:0051235 | maintenance of location | IEP | Enrichment |
| BP | GO:0051651 | maintenance of location in cell | IEP | Enrichment |
| BP | GO:0070925 | organelle assembly | IEP | Enrichment |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | Enrichment |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Enrichment |
| BP | GO:1901661 | quinone metabolic process | IEP | Enrichment |
| BP | GO:1901663 | quinone biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022800 | Spt4/RpoE2_Znf | 25 | 100 |
| No external refs found! |