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  5. OT_01G01330.1

OT_01G01330.1


Description : Ion transport domain [Interproscan].


Gene families : OG_01_0000077 (OrthoFinder) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: OT_01G01330.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000254.3 tig00000254_g22448.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000405.21 tig00000405_g453.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000498.13 tig00000498_g1589.t1 No description available 0.01 OrthoFinder
Cre10.g444850 30790145, CAV7 No description available 0.03 OrthoFinder
Cre12.g532350 30792883, CAV8 No description available 0.02 OrthoFinder
Cre16.g665050 30777353, CAV2 No description available 0.06 OrthoFinder
Cre16.g667350 30778190, CAV6 No description available 0.01 OrthoFinder
Cre17.g720600 30782719, CAV1 No description available 0.02 OrthoFinder
Cz08g09230.t1 No alias Ion transport domain [Interproscan]. 0.07 OrthoFinder
EOD26760 No alias Ion transport domain [Interproscan]. 0.01 OrthoFinder
OT_01G06690.1 No alias Ion transport domain [Interproscan]. 0.03 OrthoFinder
Vocar.0004s0321.1 32889539 Ion transport domain [Interproscan]. 0.01 OrthoFinder
Vocar.0066s0019.1 32891735 Ion transport domain [Interproscan]. 0.01 OrthoFinder
XM_002508078.1 MICPUN_105920, 105920 Voltage-gated ion channel superfamily (CAV2) 0.03 OrthoFinder
XM_003062020.1 MicpuC2_21004, 21004 Voltage-gated ion channel superfamily 0.02 OrthoFinder
XM_003062221.1 MicpuC2_21063, 21063 Voltage-gated ion channel superfamily 0.04 OrthoFinder
lcl|BLLF01000397.1_cds_GFH11377.1_5854 HaLaN_06864, GFH11377 EF-hand domain-containing protein 0.02 OrthoFinder
lcl|BLLF01000397.1_cds_GFH11379.1_5856 HaLaN_06866, GFH11379 Ion transport domain [Interproscan]. 0.03 OrthoFinder
lcl|BLLF01000792.1_cds_GFH14993.1_9470 HaLaN_11140, GFH14993 Ion transport domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002156.1_cds_GFH22929.1_17406 HaLaN_20465, GFH22929 Voltage-gated Ca2+ channel, alpha subunit 0.01 OrthoFinder
lcl|BLLF01003644.1_cds_GFH27847.1_22324 HaLaN_26231, GFH27847 Ion transport domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 26 324
IPR005821 Ion_trans_dom 862 1133
IPR005821 Ion_trans_dom 1183 1416
IPR005821 Ion_trans_dom 416 640
No external refs found!