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  5. XM_003064423.1

XM_003064423.1 (MicpuC2_23630, 23630)


Aliases : MicpuC2_23630, 23630

Description : ATPase, AAA-type, core [Interproscan].


Gene families : OG_01_0003555 (OrthoFinder) Phylogenetic Tree(s): OG0003555_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003064423.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Cre16.g686950 30777376, CTF18 Replication factor C subunit 1 OS=Oryza sativa subsp. japonica 0.04 OrthoFinder
Cz13g19090.t1 No alias ATPase, AAA-type, core [Interproscan]. 0.04 OrthoFinder
OT_18G00300.1 No alias ATPase, AAA-type, core [Interproscan]. 0.1 OrthoFinder
PTI_07G04200.1 No alias ATPase, AAA-type, core [Interproscan]. 0.03 OrthoFinder
Sro1156_g247260.1 Contig4160.g31773 Fidelity protein 18 homolog 0.02 OrthoFinder
Transcript_contig_4195 4195 Hypothetical protein 0.02 OrthoFinder
XM_002500610.1 MICPUN_66092, 66092 Hypothetical protein 0.1 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
BP GO:0000724 double-strand break repair via homologous recombination IEP Enrichment
BP GO:0000725 recombinational repair IEP Enrichment
CC GO:0000776 kinetochore IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006177 GMP biosynthetic process IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006302 double-strand break repair IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009254 peptidoglycan turnover IEP Enrichment
BP GO:0010498 proteasomal protein catabolic process IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0030163 protein catabolic process IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
BP GO:0031144 proteasome localization IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
BP GO:0031503 protein-containing complex localization IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0034629 cellular protein-containing complex localization IEP Enrichment
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
BP GO:0046037 GMP metabolic process IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
BP GO:0071630 nuclear protein quality control by the ubiquitin-proteasome system IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 104 200
No external refs found!