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Aliases : MicpuC2_29935, 29935
Description : Pre-mRNA-splicing factor SLU7 domain [Interproscan].
Gene families : OG_01_0003323 (OrthoFinder) Phylogenetic Tree(s): OG0003323_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_003063791.1 | |
| Cluster | HCCA: Cluster_43 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000217.42 | tig00000217_g19173.t1 | Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
| Cre03.g194000 | 30787426 | Pre-mRNA-splicing factor SLU7 OS=Oryza sativa subsp. indica | 0.03 | OrthoFinder | |
| Dusal.0171s00012.1 | 33202856 | Pre-mRNA-splicing factor SLU7 domain [Interproscan]. | 0.02 | OrthoFinder | |
| EOD41716 | No alias | Pre-mRNA-splicing factor SLU7 domain [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| CC | GO:0000439 | transcription factor TFIIH core complex | IEP | Enrichment |
| MF | GO:0001671 | ATPase activator activity | IEP | Enrichment |
| MF | GO:0003682 | chromatin binding | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005643 | nuclear pore | IEP | Enrichment |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0008237 | metallopeptidase activity | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| BP | GO:0019748 | secondary metabolic process | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| BP | GO:0030638 | polyketide metabolic process | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021715 | Slu7_dom | 134 | 405 |
| No external refs found! |