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  5. XM_003063612.1

XM_003063612.1 (MicpuC2_44966, 44966)


Aliases : MicpuC2_44966, 44966

Description : ClpA/ClpB, AAA lid domain; Clp, N-terminal; ATPase, AAA-type, core; Clp ATPase, C-terminal [Interproscan].


Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003063612.1
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
Cz09g12050.t1 No alias Clp ATPase, C-terminal; ClpA/ClpB, AAA lid domain;... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
CC GO:0000439 transcription factor TFIIH core complex IEP Enrichment
MF GO:0001671 ATPase activator activity IEP Enrichment
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006289 nucleotide-excision repair IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0017038 protein import IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0030118 clathrin coat IEP Enrichment
CC GO:0030125 clathrin vesicle coat IEP Enrichment
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Enrichment
CC GO:0030132 clathrin coat of coated pit IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0060590 ATPase regulator activity IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR019489 Clp_ATPase_C 729 807
IPR041546 ClpA/ClpB_AAA_lid 347 449
IPR003959 ATPase_AAA_core 209 325
IPR003959 ATPase_AAA_core 548 723
IPR004176 Clp_R_dom 16 68
IPR004176 Clp_R_dom 91 143
No external refs found!