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  5. XM_003063429.1

XM_003063429.1 (MicpuC2_49736, 49736)


Aliases : MicpuC2_49736, 49736

Description : Ribosomal protein L21e [Interproscan].


Gene families : OG_01_0003022 (OrthoFinder) Phylogenetic Tree(s): OG0003022_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003063429.1
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000640.5 tig00000640_g2759.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 OrthoFinder
Cre06.g278135 30779568, RPL21 Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 OrthoFinder
Cz04g01160.t1 No alias Ribosomal protein L21e [Interproscan]. 0.11 OrthoFinder
Dusal.1405s00001.1 33194454 Ribosomal protein L21e [Interproscan]. 0.08 OrthoFinder
OT_16G01800.1 No alias Ribosomal protein L21e [Interproscan]. 0.13 OrthoFinder
PTI_11G01510.1 No alias Ribosomal protein L21e [Interproscan]. 0.2 OrthoFinder
Sro2397_g326060.1 Contig2368.g19493 60S ribosomal protein L21 0.22 OrthoFinder
SymbC1.scaffold5018.4 5018.4 Ribosomal protein L21e [Interproscan]. 0.02 OrthoFinder
TP07G05810.1 No alias Ribosomal protein L21e [Interproscan]. 0.2 OrthoFinder
Vocar.0002s0600.1 32890806 Ribosomal protein L21e [Interproscan]. 0.07 OrthoFinder
XM_002506309.1 MICPUN_95995, 95995 Ribosomal protein L21e [Interproscan]. 0.17 OrthoFinder
lcl|BLLF01002302.1_cds_GFH23564.1_18041 HaLaN_21192, GFH23564 60S ribosomal protein L21-1 0.04 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57524.1_9173 PRW57524 60S ribosomal L21-1-like 0.06 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8499114.1_8067 KAA8499114 60S ribosomal protein L21-A 0.11 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
MF GO:0004788 thiamine diphosphokinase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005740 mitochondrial envelope IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0030975 thiamine binding IEP Enrichment
CC GO:0031967 organelle envelope IEP Enrichment
CC GO:0031975 envelope IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0042357 thiamine diphosphate metabolic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Enrichment
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001147 Ribosomal_L21e 7 105
No external refs found!