XM_003063234.1 (MicpuC2_11758, 11758)

Aliases : MicpuC2_11758, 11758

Description : Cobalamin (vitamin B12) biosynthesis CbiX [Interproscan].

Gene families : OG_01_0003334 (OrthoFinder) Phylogenetic Tree(s): OG0003334_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: XM_003063234.1
Cluster	HCCA: Cluster_102

Target	Alias	Description	ECC score	Gene Family Method	Actions
Sro85_g045130.1	Contig4580.g34190	Sirohydrochlorin	0.01	OrthoFinder
XM_002506304.1	MICPUN_73025, 73025	Cobalamin (vitamin B12) biosynthesis CbiX [Interproscan].	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006766	vitamin metabolic process	None	Extended
BP	GO:0006767	water-soluble vitamin metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009110	vitamin biosynthetic process	None	Extended
BP	GO:0009235	cobalamin metabolic process	None	Extended
BP	GO:0009236	cobalamin biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016852	sirohydrochlorin cobaltochelatase activity	IEA	Interproscan
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042364	water-soluble vitamin biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Enrichment
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Enrichment
CC	GO:0005852	eukaryotic translation initiation factor 3 complex	IEP	Enrichment
BP	GO:0006508	proteolysis	IEP	Enrichment
BP	GO:0006777	Mo-molybdopterin cofactor biosynthetic process	IEP	Enrichment
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Enrichment
MF	GO:0008233	peptidase activity	IEP	Enrichment
MF	GO:0008236	serine-type peptidase activity	IEP	Enrichment
BP	GO:0009262	deoxyribonucleotide metabolic process	IEP	Enrichment
BP	GO:0009263	deoxyribonucleotide biosynthetic process	IEP	Enrichment
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Enrichment
MF	GO:0017171	serine hydrolase activity	IEP	Enrichment
BP	GO:0019720	Mo-molybdopterin cofactor metabolic process	IEP	Enrichment
MF	GO:0030695	GTPase regulator activity	IEP	Enrichment
BP	GO:0043545	molybdopterin cofactor metabolic process	IEP	Enrichment
BP	GO:0051189	prosthetic group metabolic process	IEP	Enrichment
MF	GO:0070569	uridylyltransferase activity	IEP	Enrichment
MF	GO:0071949	FAD binding	IEP	Enrichment
BP	GO:0090407	organophosphate biosynthetic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002762	CbiX-like	5	88

External Links

No external refs found!

XM_003063234.1 (MicpuC2_11758, 11758)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation