XM_003063060.1 (MicpuC2_52802, 52802)

Aliases : MicpuC2_52802, 52802

Description : ATP-binding cassette superfamily

Gene families : OG_01_0000021 (OrthoFinder) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: XM_003063060.1
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000158.59	tig00000158_g10163.t1	Solute transport.primary active transport.ABC...	0.01	OrthoFinder
Cpa\|evm.model.tig00021537.72	tig00021537_g22323.t1	ABC transporter G family member 7 OS=Arabidopsis thaliana	0.02	OrthoFinder
Cre17.g717050	30782048	ABC transporter G family member 21 OS=Arabidopsis thaliana	0.03	OrthoFinder
Cz03g15170.t1	No alias	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.02	OrthoFinder
OT_05G03580.1	No alias	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.05	OrthoFinder
PTI_01G00360.1	No alias	ABC transporter-like; ABC-2 type transporter [Interproscan].	0.02	OrthoFinder
Sro7_g006000.1	Contig389.g5253	Putative white-brown complex homolog protein 30	0.02	OrthoFinder
SymbC1.scaffold1118.4	1118.4	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.01	OrthoFinder
SymbC1.scaffold193.5	193.5	ABC-2 type transporter; ABC transporter-like [Interproscan].	0.01	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8498384.1_7337	KAA8498384	ABC transporter G family member 22	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005576	extracellular region	IEP	Enrichment
BP	GO:0009405	obsolete pathogenesis	IEP	Enrichment
MF	GO:0030248	cellulose binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	165	339
IPR013525	ABC_2_trans	494	701

External Links

No external refs found!