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  5. Cpa|evm.model.tig00000194.37

Cpa|evm.model.tig00000194.37 (tig00000194_g14765.t1)


Aliases : tig00000194_g14765.t1

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3a component


Gene families : OG_01_0003131 (OrthoFinder) Phylogenetic Tree(s): OG0003131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000194.37
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
Cre13.g564250 30784684, EIF3A Protein biosynthesis.translation... 0.1 OrthoFinder
Cz05g13210.t1 No alias Proteasome component (PCI) domain [Interproscan]. 0.05 OrthoFinder
Dusal.0995s00002.1 33185920 Proteasome component (PCI) domain [Interproscan]. 0.04 OrthoFinder
EOD23695 No alias Hypothetical protein [Ensembl]. 0.04 OrthoFinder
OT_07G04440.1 No alias Proteasome component (PCI) domain [Interproscan]. 0.07 OrthoFinder
Sro1610_g285820.1 Contig4416.g33187 Factor 3 subunit A 0.06 OrthoFinder
Vocar.0028s0068.1 32895705 Proteasome component (PCI) domain [Interproscan]. 0.04 OrthoFinder
XM_002503908.1 MICPUN_94701, 94701 Proteasome component (PCI) domain [Interproscan]. 0.09 OrthoFinder
XM_003055469.1 MicpuC2_46246, 46246 Proteasome component (PCI) domain [Interproscan]. 0.05 OrthoFinder
lcl|BLLF01000888.1_cds_GFH15705.1_10182 HaLaN_11983, GFH15705 Eukaryotic translation initiation factor 3 subunit 10 0.04 OrthoFinder
lcl|BLLF01001590.1_cds_GFH20181.1_14658 HaLaN_17263, GFH20181 Eukaryotic translation initiation factor 3 subunit 10 0.02 OrthoFinder
lcl|BLLF01001590.1_cds_GFH20182.1_14659 HaLaN_17264, GFH20182 Eukaryotic translation initiation factor 3 subunit 10 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59149.1_6875 PRW59149 Eukaryotic translation initiation factor 3 subunit A-like 0.08 OrthoFinder
lcl|VRMN01000012.1_cds_KAA8491696.1_5164 KAA8491696 Eukaryotic translation initiation factor 3 subunit A 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004512 inositol-3-phosphate synthase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004814 arginine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
CC GO:0005956 protein kinase CK2 complex IEP Enrichment
BP GO:0006020 inositol metabolic process IEP Enrichment
BP GO:0006021 inositol biosynthetic process IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006420 arginyl-tRNA aminoacylation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015298 solute:cation antiporter activity IEP Enrichment
MF GO:0015299 solute:proton antiporter activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019751 polyol metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
BP GO:0046173 polyol biosynthetic process IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000717 PCI_dom 367 489
No external refs found!