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  5. XM_003062221.1

XM_003062221.1 (MicpuC2_21063, 21063)


Aliases : MicpuC2_21063, 21063

Description : Voltage-gated ion channel superfamily


Gene families : OG_01_0000077 (OrthoFinder) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003062221.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000254.3 tig00000254_g22448.t1 No description available 0.04 OrthoFinder
Cpa|evm.model.tig00000254.4 tig00000254_g22450.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000405.21 tig00000405_g453.t1 No description available 0.02 OrthoFinder
Cpa|evm.model.tig00000498.13 tig00000498_g1589.t1 No description available 0.03 OrthoFinder
Cre10.g444850 30790145, CAV7 No description available 0.04 OrthoFinder
Cre12.g532350 30792883, CAV8 No description available 0.03 OrthoFinder
Cre16.g665050 30777353, CAV2 No description available 0.04 OrthoFinder
Cre16.g667350 30778190, CAV6 No description available 0.02 OrthoFinder
Cre16.g667451 30777477 No description available 0.02 OrthoFinder
Cz08g09230.t1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
EOD26760 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
OT_01G01330.1 No alias Ion transport domain [Interproscan]. 0.04 OrthoFinder
OT_01G06690.1 No alias Ion transport domain [Interproscan]. 0.03 OrthoFinder
OT_04G02850.1 No alias Ion transport domain [Interproscan]. 0.03 OrthoFinder
Vocar.0066s0019.1 32891735 Ion transport domain [Interproscan]. 0.02 OrthoFinder
XM_002508757.1 MICPUN_95305, 95305 Voltage-gated ion channel superfamily (CAV1) 0.02 OrthoFinder
XM_003056769.1 MicpuC2_32293, 32293 Voltage-gated ion channel superfamily 0.02 OrthoFinder
lcl|BLLF01000397.1_cds_GFH11377.1_5854 HaLaN_06864, GFH11377 EF-hand domain-containing protein 0.02 OrthoFinder
lcl|BLLF01002156.1_cds_GFH22929.1_17406 HaLaN_20465, GFH22929 Voltage-gated Ca2+ channel, alpha subunit 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
CC GO:0005875 microtubule associated complex IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
CC GO:0030286 dynein complex IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 1021 1262
IPR005821 Ion_trans_dom 709 970
IPR005821 Ion_trans_dom 394 622
IPR005821 Ion_trans_dom 43 320
IPR031649 GPHH_dom 1276 1310
No external refs found!