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  5. XM_003062020.1

XM_003062020.1 (MicpuC2_21004, 21004)


Aliases : MicpuC2_21004, 21004

Description : Voltage-gated ion channel superfamily


Gene families : OG_01_0000077 (OrthoFinder) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003062020.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000498.13 tig00000498_g1589.t1 No description available 0.02 OrthoFinder
Cre10.g444850 30790145, CAV7 No description available 0.03 OrthoFinder
Cre16.g665050 30777353, CAV2 No description available 0.03 OrthoFinder
Cre16.g667350 30778190, CAV6 No description available 0.02 OrthoFinder
Cre16.g667451 30777477 No description available 0.02 OrthoFinder
Cre17.g720600 30782719, CAV1 No description available 0.02 OrthoFinder
Dusal.0044s00007.1 33194913 Ion transport domain [Interproscan]. 0.02 OrthoFinder
Dusal.0504s00017.1 33188689 Hypothetical protein 0.02 OrthoFinder
OT_01G01330.1 No alias Ion transport domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54760 54760 Ion transport domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_8200 8200 Ion transport domain [Interproscan]. 0.01 OrthoFinder
Vocar.0017s0009.1 32891450 Ion transport domain [Interproscan]. 0.02 OrthoFinder
Vocar.0066s0019.1 32891735 Ion transport domain [Interproscan]. 0.02 OrthoFinder
XM_002508078.1 MICPUN_105920, 105920 Voltage-gated ion channel superfamily (CAV2) 0.03 OrthoFinder
lcl|BLLF01000452.1_cds_GFH11955.1_6432 HaLaN_07553, GFH11955 Ion transport domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000792.1_cds_GFH14993.1_9470 HaLaN_11140, GFH14993 Ion transport domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002156.1_cds_GFH22929.1_17406 HaLaN_20465, GFH22929 Voltage-gated Ca2+ channel, alpha subunit 0.03 OrthoFinder
lcl|BLLF01003644.1_cds_GFH27847.1_22324 HaLaN_26231, GFH27847 Ion transport domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA Interproscan
BP GO:0006811 ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 49 320
IPR005821 Ion_trans_dom 370 613
No external refs found!