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  5. XM_003060655.1

XM_003060655.1 (MicpuC2_49651, 49651)


Aliases : MicpuC2_49651, 49651

Description : NURF complex component


Gene families : OG_01_0003117 (OrthoFinder) Phylogenetic Tree(s): OG0003117_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003060655.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Cre12.g523200 30792941 Chromatin organisation.histone modifications.histone... 0.08 OrthoFinder
Cz05g15140.t1 No alias WD40 repeat; Histone-binding protein RBBP4, N-terminal... 0.03 OrthoFinder
OT_12G00120.1 No alias Histone-binding protein RBBP4, N-terminal; WD40 repeat;... 0.07 OrthoFinder
Sro1_g000700.1 Contig3007.g23985 Probable histone-binding protein lin-53 0.06 OrthoFinder
Transcript_contig_54786 54786 Histone-binding protein RBBP4, N-terminal; WD40 repeat... 0.01 OrthoFinder
Vocar.0006s0459.1 32894188 WD40 repeat; Histone-binding protein RBBP4, N-terminal... 0.03 OrthoFinder
XM_002504862.1 MICPUN_86547, 86547 NURF complex component 0.13 OrthoFinder
lcl|BLLF01001650.1_cds_GFH20512.1_14989 HaLaN_17649, GFH20512 WD-40 repeat-containing protein MSI1 0.05 OrthoFinder
lcl|LHPG02000007.1_cds_PRW56977.1_9114 PRW56977 WD-40 repeat-containing MSI1 0.03 OrthoFinder
lcl|VRMN01000008.1_cds_KAA8492986.1_2722 KAA8492986 Histone-binding protein RBBP4 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
BP GO:0000226 microtubule cytoskeleton organization IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003689 DNA clamp loader activity IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0004146 dihydrofolate reductase activity IEP Enrichment
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP Enrichment
MF GO:0005049 nuclear export signal receptor activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005663 DNA replication factor C complex IEP Enrichment
CC GO:0005815 microtubule organizing center IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006259 DNA metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006310 DNA recombination IEP Enrichment
BP GO:0006333 chromatin assembly or disassembly IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006606 protein import into nucleus IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006760 folic acid-containing compound metabolic process IEP Enrichment
BP GO:0006886 intracellular protein transport IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007021 tubulin complex assembly IEP Enrichment
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008184 glycogen phosphorylase activity IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
CC GO:0016272 prefoldin complex IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016597 amino acid binding IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0030896 checkpoint clamp complex IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0034453 microtubule anchoring IEP Enrichment
BP GO:0034504 protein localization to nucleus IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046653 tetrahydrofolate metabolic process IEP Enrichment
BP GO:0046654 tetrahydrofolate biosynthetic process IEP Enrichment
BP GO:0046907 intracellular transport IEP Enrichment
MF GO:0048487 beta-tubulin binding IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051170 import into nucleus IEP Enrichment
BP GO:0051641 cellular localization IEP Enrichment
BP GO:0051649 establishment of localization in cell IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
MF GO:0061608 nuclear import signal receptor activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140142 nucleocytoplasmic carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR001680 WD40_repeat 221 257
IPR001680 WD40_repeat 266 303
IPR001680 WD40_repeat 370 403
IPR001680 WD40_repeat 310 347
IPR022052 Histone-bd_RBBP4_N 19 88
No external refs found!