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  5. XM_003060440.1

XM_003060440.1 (MicpuC2_60365, 60365)


Aliases : MicpuC2_60365, 60365

Description : E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon; Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003060440.1
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000227.13 tig00000227_g19807.t1 No description available 0.02 OrthoFinder
Cre01.g051700 30788781 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder
Cz09g32220.t1 No alias Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
OT_04G04210.1 No alias Zinc finger, RING-type; E3 ubiquitin-protein ligase... 0.02 OrthoFinder
XM_002503861.1 MICPUN_50956, 50956 Zinc finger, RING-type [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496935.1_664 KAA8496935 E3 ubiquitin-protein ligase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEP Enrichment
BP GO:0006081 cellular aldehyde metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
BP GO:0017004 cytochrome complex assembly IEP Enrichment
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Enrichment
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
BP GO:0046490 isopentenyl diphosphate metabolic process IEP Enrichment
BP GO:0050992 dimethylallyl diphosphate biosynthetic process IEP Enrichment
BP GO:0050993 dimethylallyl diphosphate metabolic process IEP Enrichment
MF GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 245 287
IPR039525 RNF126-like_zinc-ribbon 30 64
No external refs found!