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  5. XM_003060312.1

XM_003060312.1 (MicpuC2_49648, 49648)


Aliases : MicpuC2_49648, 49648

Description : Ribosomal protein S3Ae [Interproscan].


Gene families : OG_01_0002820 (OrthoFinder) Phylogenetic Tree(s): OG0002820_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003060312.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020710.39 tig00020710_g13273.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 OrthoFinder
Cre13.g568650 30784327, RPS3a Protein biosynthesis.cytosolic ribosome.small subunit... 0.14 OrthoFinder
Cz10g21050.t1 No alias Ribosomal protein S3Ae [Interproscan]. 0.12 OrthoFinder
Dusal.0093s00008.1 33185336 Ribosomal protein S3Ae [Interproscan]. 0.09 OrthoFinder
EOD08172 No alias Ribosomal protein S3Ae [Interproscan]. 0.13 OrthoFinder
EOD18963 No alias Ribosomal protein S3Ae [Interproscan]. 0.15 OrthoFinder
OT_20G00130.1 No alias Ribosomal protein S3Ae [Interproscan]. 0.17 OrthoFinder
PTI_01G05430.1 No alias Ribosomal protein S3Ae [Interproscan]. 0.2 OrthoFinder
Sro174_g076500.1 Contig4298.g32434 40S ribosomal protein S1 0.21 OrthoFinder
Sro920_g220290.1 Contig2508.g20529 40S ribosomal protein S1 0.21 OrthoFinder
SymbC1.scaffold7952.3 7952.3 Ribosomal protein S3Ae [Interproscan]. 0.02 OrthoFinder
TP20G01320.1 No alias Ribosomal protein S3Ae [Interproscan]. 0.16 OrthoFinder
XM_002505213.1 MICPUN_95475, 95475 Ribosomal protein S3Ae [Interproscan]. 0.16 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39385.1_2562 PRW39385 40S ribosomal S3a-2 isoform A 0.1 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498213.1_7166 KAA8498213 40S ribosomal protein S3a 0.1 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000275 mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005750 mitochondrial respiratory chain complex III IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006754 ATP biosynthetic process IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009141 nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Enrichment
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0009260 ribonucleotide biosynthetic process IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Enrichment
BP GO:0015986 ATP synthesis coupled proton transport IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019646 aerobic electron transport chain IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
MF GO:0030515 snoRNA binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
CC GO:0045275 respiratory chain complex III IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046390 ribose phosphate biosynthetic process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0098803 respiratory chain complex IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR001593 Ribosomal_S3Ae 15 221
No external refs found!