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  5. XM_003060010.1

XM_003060010.1 (MicpuC2_59415, 59415)


Aliases : MicpuC2_59415, 59415

Description : SAM-dependent methyltransferase RsmB/NOP2-type [Interproscan].


Gene families : OG_01_0000532 (OrthoFinder) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003060010.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020562.25 tig00020562_g11151.t1 RNA processing.RNA modification.rRNA/tRNA... 0.02 OrthoFinder
EOD41942 No alias SAM-dependent methyltransferase RsmB/NOP2-type [Interproscan]. 0.01 OrthoFinder
OT_08G01440.1 No alias SAM-dependent methyltransferase RsmB/NOP2-type [Interproscan]. 0.02 OrthoFinder
Sro514_g158160.1 Contig3991.g30657 Multisite-specific tRNA:(cytosine-C(5))-methyltransferase trm4b 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004832 valine-tRNA ligase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006383 transcription by RNA polymerase III IEP Enrichment
BP GO:0006438 valyl-tRNA aminoacylation IEP Enrichment
BP GO:0009235 cobalamin metabolic process IEP Enrichment
BP GO:0009236 cobalamin biosynthetic process IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
CC GO:0030677 ribonuclease P complex IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
CC GO:1902555 endoribonuclease complex IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001678 MeTrfase_RsmB/NOP2 363 451
No external refs found!