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Aliases : MicpuC2_59380, 59380
Description : cwf18 pre-mRNA splicing factor [Interproscan].
Gene families : OG_01_0003828 (OrthoFinder) Phylogenetic Tree(s): OG0003828_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_003059708.1 | |
| Cluster | HCCA: Cluster_28 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre12.g518300 | 30791790 | No description available | 0.02 | OrthoFinder | |
| Vocar.0006s0367.1 | 32894135 | cwf18 pre-mRNA splicing factor [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000350 | generation of catalytic spliceosome for second transesterification step | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003729 | mRNA binding | IEP | Enrichment |
| MF | GO:0004107 | chorismate synthase activity | IEP | Enrichment |
| MF | GO:0004340 | glucokinase activity | IEP | Enrichment |
| MF | GO:0004396 | hexokinase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005536 | glucose binding | IEP | Enrichment |
| CC | GO:0005685 | U1 snRNP | IEP | Enrichment |
| BP | GO:0006376 | mRNA splice site selection | IEP | Enrichment |
| MF | GO:0008963 | phospho-N-acetylmuramoyl-pentapeptide-transferase activity | IEP | Enrichment |
| BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Enrichment |
| BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Enrichment |
| MF | GO:0016706 | 2-oxoglutarate-dependent dioxygenase activity | IEP | Enrichment |
| MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Enrichment |
| MF | GO:0016838 | carbon-oxygen lyase activity, acting on phosphates | IEP | Enrichment |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | Enrichment |
| BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Enrichment |
| MF | GO:0030246 | carbohydrate binding | IEP | Enrichment |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Enrichment |
| CC | GO:0031082 | BLOC complex | IEP | Enrichment |
| CC | GO:0031083 | BLOC-1 complex | IEP | Enrichment |
| MF | GO:0031406 | carboxylic acid binding | IEP | Enrichment |
| MF | GO:0031418 | L-ascorbic acid binding | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| MF | GO:0043177 | organic acid binding | IEP | Enrichment |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
| MF | GO:0048029 | monosaccharide binding | IEP | Enrichment |
| BP | GO:0051156 | glucose 6-phosphate metabolic process | IEP | Enrichment |
| MF | GO:0051213 | dioxygenase activity | IEP | Enrichment |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Enrichment |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |