XM_003059467.1 (MicpuC2_69598, 69598)

Aliases : MicpuC2_69598, 69598

Description : Helicase, C-terminal; SNF2-related, N-terminal domain [Interproscan].

Gene families : OG_01_0001784 (OrthoFinder) Phylogenetic Tree(s): OG0001784_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: XM_003059467.1
Cluster	HCCA: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method	Actions
Sro179_g078480.1	Contig4117.g31440	F-box protein At3g54460	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003989	acetyl-CoA carboxylase activity	IEP	Enrichment
MF	GO:0004526	ribonuclease P activity	IEP	Enrichment
MF	GO:0004549	tRNA-specific ribonuclease activity	IEP	Enrichment
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	Enrichment
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	Enrichment
MF	GO:0005542	folic acid binding	IEP	Enrichment
BP	GO:0006633	fatty acid biosynthetic process	IEP	Enrichment
BP	GO:0007264	small GTPase mediated signal transduction	IEP	Enrichment
MF	GO:0008080	N-acetyltransferase activity	IEP	Enrichment
MF	GO:0010181	FMN binding	IEP	Enrichment
BP	GO:0015858	nucleoside transport	IEP	Enrichment
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Enrichment
MF	GO:0016407	acetyltransferase activity	IEP	Enrichment
MF	GO:0016410	N-acyltransferase activity	IEP	Enrichment
MF	GO:0016421	CoA carboxylase activity	IEP	Enrichment
MF	GO:0016740	transferase activity	IEP	Enrichment
MF	GO:0016746	acyltransferase activity	IEP	Enrichment
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	Enrichment
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	IEP	Enrichment
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Enrichment
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Enrichment
MF	GO:0031406	carboxylic acid binding	IEP	Enrichment
MF	GO:0043177	organic acid binding	IEP	Enrichment
MF	GO:0072341	modified amino acid binding	IEP	Enrichment
MF	GO:0098599	palmitoyl hydrolase activity	IEP	Enrichment
BP	GO:1901264	carbohydrate derivative transport	IEP	Enrichment
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Enrichment
BP	GO:1901642	nucleoside transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	479	574
IPR000330	SNF2_N	3	215

External Links

No external refs found!

XM_003059467.1 (MicpuC2_69598, 69598)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation