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Aliases : MicpuC2_17677, 17677
Description : Pumilio RNA-binding repeat [Interproscan].
Gene families : OG_01_0000430 (OrthoFinder) Phylogenetic Tree(s): OG0000430_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: XM_003059264.1 | |
| Cluster | HCCA: Cluster_97 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Dusal.0013s00027.1 | 33200926 | Pumilio RNA-binding repeat [Interproscan]. | 0.01 | OrthoFinder | |
| SymbC1.scaffold6228.1 | 6228.1 | Pumilio RNA-binding repeat [Interproscan]. | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000444 | MIS12/MIND type complex | IEP | Enrichment |
| CC | GO:0000818 | nuclear MIS12/MIND complex | IEP | Enrichment |
| MF | GO:0003774 | motor activity | IEP | Enrichment |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Enrichment |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| CC | GO:0005694 | chromosome | IEP | Enrichment |
| BP | GO:0006265 | DNA topological change | IEP | Enrichment |
| BP | GO:0006914 | autophagy | IEP | Enrichment |
| BP | GO:0006996 | organelle organization | IEP | Enrichment |
| MF | GO:0008017 | microtubule binding | IEP | Enrichment |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Enrichment |
| MF | GO:0008094 | ATPase, acting on DNA | IEP | Enrichment |
| MF | GO:0015631 | tubulin binding | IEP | Enrichment |
| CC | GO:0016459 | myosin complex | IEP | Enrichment |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0016887 | ATPase | IEP | Enrichment |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
| BP | GO:0022603 | regulation of anatomical structure morphogenesis | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| BP | GO:0045765 | regulation of angiogenesis | IEP | Enrichment |
| BP | GO:0050793 | regulation of developmental process | IEP | Enrichment |
| BP | GO:0051239 | regulation of multicellular organismal process | IEP | Enrichment |
| BP | GO:0051276 | chromosome organization | IEP | Enrichment |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Enrichment |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Enrichment |
| BP | GO:1901342 | regulation of vasculature development | IEP | Enrichment |
| BP | GO:2000026 | regulation of multicellular organismal development | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001313 | Pumilio_RNA-bd_rpt | 210 | 239 |
| IPR001313 | Pumilio_RNA-bd_rpt | 129 | 161 |
| IPR001313 | Pumilio_RNA-bd_rpt | 23 | 54 |
| IPR001313 | Pumilio_RNA-bd_rpt | 245 | 275 |
| IPR001313 | Pumilio_RNA-bd_rpt | 292 | 318 |
| IPR001313 | Pumilio_RNA-bd_rpt | 166 | 200 |
| IPR001313 | Pumilio_RNA-bd_rpt | 92 | 119 |
| IPR001313 | Pumilio_RNA-bd_rpt | 62 | 89 |
| No external refs found! |