XM_003059014.1 (MicpuC2_58503, 58503)


Aliases : MicpuC2_58503, 58503

Description : tRNA (guanine-N-7) methyltransferase, Trmb type; Pentatricopeptide repeat [Interproscan].


Gene families : OG_01_0004653 (OrthoFinder) Phylogenetic Tree(s): OG0004653_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: XM_003059014.1
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
XM_002500285.1 MICPUN_99225, 99225 tRNA (guanine-N-7) methyltransferase, Trmb type;... 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006400 tRNA modification IEA Interproscan
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0004555 alpha,alpha-trehalase activity IEP Enrichment
CC GO:0005849 mRNA cleavage factor complex IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0006378 mRNA polyadenylation IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006771 riboflavin metabolic process IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009231 riboflavin biosynthetic process IEP Enrichment
BP GO:0009311 oligosaccharide metabolic process IEP Enrichment
CC GO:0009349 riboflavin synthase complex IEP Enrichment
MF GO:0015927 trehalase activity IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP Enrichment
BP GO:0031123 RNA 3'-end processing IEP Enrichment
BP GO:0031124 mRNA 3'-end processing IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0031418 L-ascorbic acid binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042726 flavin-containing compound metabolic process IEP Enrichment
BP GO:0042727 flavin-containing compound biosynthetic process IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0043631 RNA polyadenylation IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
MF GO:0051213 dioxygenase activity IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR003358 tRNA_(Gua-N-7)_MeTrfase_Trmb 489 619
IPR002885 Pentatricopeptide_repeat 163 212
IPR002885 Pentatricopeptide_repeat 227 281
No external refs found!